PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022993652.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 301aa MW: 33393.4 Da PI: 6.9022

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022993652.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.5	2.4e-18	82	134	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe +++ e++ +LAk lgL+ rqV +WFqNrRa++k XP_022993652.1 82 KKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPRQVAIWFQNRRARWK 134 4568889*********************************************9 PP
2	HD-ZIP_I/II	127.5	5.6e-41	80	171	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl+ eqvk+LE+sFe +kLeperK +la++Lglqprqva+WFqnrRAR+ktkqlE+dye+Lk+++++lk++n+ L++++++L+++l XP_022993652.1 80 EKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPRQVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNSKLHAQLL 171 69**************************************************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MASPHHSHSF LFQSRPADHH EYLPSASFNA IPSCPPHLYF HDGVIPVMMK RSMSFSGVEN 60 GCEEVNGDEG LSDDGLALGE KKKRLNLEQV KALEKSFELG NKLEPERKIQ LAKALGLQPR 120 QVAIWFQNRR ARWKTKQLER DYEVLKKHFE SLKADNDVLQ AQNSKLHAQL LALKTKDTGE 180 VAGGGATMNL KKENERCWSS DNSCDINLDI SKTQAAINGG EGGRACCEPG IKDLFPSAAF 240 RSGAITQLIQ RGSSRSTVDH PQVIQEESFS QMFNGIEEQQ QTAAAAAGFW PWGSDQSSHF 300 N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	137	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15150.1	5e-79	HD-ZIP family protein