PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022992979.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 221aa MW: 23822.3 Da PI: 7.5226 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.8 | 0.00017 | 71 | 93 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ Cg++F++ L H ++H XP_022992979.1 71 YECKTCGRTFPSFRALGGHRSSH 93 99**********99999999888 PP | |||||||
2 | zf-C2H2 | 14 | 0.00015 | 143 | 165 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg F++ L H+r+H XP_022992979.1 143 HECSVCGSDFTSVQALSGHMRRH 165 78********************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MNPNGFSEPN SELLGRCNLS SSSSSIGGGG GGGSGGEDEQ EDVAKCLILL SHQGLPEGQN 60 GAGKATECCA YECKTCGRTF PSFRALGGHR SSHKNPAMAA GDQKSISGTS PAYKHQQQRL 120 NNTISSPFDQ LRMNRTGYYH KTHECSVCGS DFTSVQALSG HMRRHHRGCG RDSGEIVHRR 180 RNLLCLELDL NLPAAEEDKR DQSGVVSMAA MDLVSSHYRE H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28200.1 | 2e-20 | C2H2 family protein |