PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022992306.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 375aa MW: 41352.4 Da PI: 10.4597

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022992306.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	50.3	6.2e-16	65	152	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Li+a e+ +l+rg+lk+++W+ev++ + +++ r+ +qCk++++ ++k+yk +k+ + + s++p++d+l+ XP_022992306.1 65 CWSEGATSVLIDAWGERYLELSRGNLKQKHWKEVADIVssreDYTKIPRTDIQCKNRIDTVKKKYKTEKAKLTAG--GGPSKWPFYDRLD 152 7***********************************87666677899********************97..67778***997 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MKEDDEIQSF PSPGSGSPAS PISNGRITVT VAAAAPPPPP SALNTITLAL PIQQSKGGGG 60 GREDCWSEGA TSVLIDAWGE RYLELSRGNL KQKHWKEVAD IVSSREDYTK IPRTDIQCKN 120 RIDTVKKKYK TEKAKLTAGG GPSKWPFYDR LDLLIGPAAS KNSVSIAGVN PPLQPNQKVP 180 LGIPVVNRPV NPYQAQQNHN HSQQQQQKGP KAQKIQYHKR PRTTDSDSSG SDRETSPTSS 240 DSYRQKKVRS KNVRVQKEVV NPKLAQVGKT EKGKNGSREK GWVNAVSELT QAILKFGEAY 300 EQAESSKLQQ VVVMEKQRMK FAKDLELQRM QFFMKTQLEI SQLKHGRRVV AAGNHHGSSS 360 NNNNNNNHSN SDSSN

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MKEDDEIQSF PSPGSGSPAS PISNGRITVT VAAAAPPPPP SALNTITLAL PIQQSKGGGG  60
GREDCWSEGA TSVLIDAWGE RYLELSRGNL KQKHWKEVAD IVSSREDYTK IPRTDIQCKN  120
RIDTVKKKYK TEKAKLTAGG GPSKWPFYDR LDLLIGPAAS KNSVSIAGVN PPLQPNQKVP  180
LGIPVVNRPV NPYQAQQNHN HSQQQQQKGP KAQKIQYHKR PRTTDSDSSG SDRETSPTSS  240
DSYRQKKVRS KNVRVQKEVV NPKLAQVGKT EKGKNGSREK GWVNAVSELT QAILKFGEAY  300
EQAESSKLQQ VVVMEKQRMK FAKDLELQRM QFFMKTQLEI SQLKHGRRVV AAGNHHGSSS  360
NNNNNNNHSN SDSSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	5e-56	Trihelix family protein