PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022992254.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 455aa    MW: 51449.4 Da    PI: 5.6276
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022992254.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3151.6e-96694543374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL ecA+a+s++d ++++++L+ l+elasp+gd+ q++a+yf++AL  + ++++ ++yk+l + ++++++ +++l+    f+e+sP+ +f+h++
  XP_022992254.1  69 TLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALFCKATETGLTCYKTLVAIADKNHSFDSSLKLILKFQEASPWTTFGHVA 163
                     6899**********************************************************9999998888888888888************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledlel 191
                      N aIlea+ege+++HiiD++ + ++QWp+Ll++La+R++++p+l++T+v   ++  k  ++e+g+r++kfA+ +gvpfefn++   ++l+dl+ 
  XP_022992254.1 164 SNGAILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTT-TTIVKSLMKEIGQRMEKFARLMGVPFEFNPItNLENLTDLTK 257
                     ***************************************************9.6679999***********************94455******* PP

            GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerik 284
                     e+L+v+++Ea+a+n++ +l r+      +e+ r++v++++ksl+P+v+++ve+ead   ++++Fl+ f e+l++y+  fd+le ++ ++s+er +
  XP_022992254.1 258 EALKVEEDEAIAINCIGALRRVR-----IEE-RNNVISMLKSLKPRVLTIVEEEADFisSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLV 346
                     *********************97.....555.889*********************9867889******************************** PP

            GRAS 285 vErellgreivnvvacegae...rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee................sgslv. 359
                     +Ere  +r+iv ++ c ++e     er+e+ ++W++rl+e+ F+ +++se++ +++k+ll+++k  g+ +  +                + + v 
  XP_022992254.1 347 LERE-CSRSIVRLLGCDESEeqmGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYK-PGWALLRRaattatatgevherddDSCGVy 439
                     ****.89*********9888333469**************************************.666665333445555566666666777777 PP

            GRAS 360 lgWkdrpLvsvSaWr 374
                     l+Wk++p+v+vSaW+
  XP_022992254.1 440 LTWKEEPVVWVSAWK 454
                     **************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    
MDITFFTAKE APTTFFNQSH DHHHHLHFSN LDMQSSTSHS SEYSPEQSPS AAAAAAAATL  60
AATGKWSSTL LKECARAISE KDSNKIHHFL WMLNELASPY GDSDQKMASY FLQALFCKAT  120
ETGLTCYKTL VAIADKNHSF DSSLKLILKF QEASPWTTFG HVASNGAILE ALEGETKLHI  180
IDISNTLCTQ WPTLLESLAT RNDDTPHLKL TVVTTTTIVK SLMKEIGQRM EKFARLMGVP  240
FEFNPITNLE NLTDLTKEAL KVEEDEAIAI NCIGALRRVR IEERNNVISM LKSLKPRVLT  300
IVEEEADFIS SKNNFLKCFE ECLRFYTLYF DMLEDSFVTT SNERLVLERE CSRSIVRLLG  360
CDESEEQMGS ERREKGKQWS KRLKESAFSL AEFSEDVLDD VKALLKRYKP GWALLRRAAT  420
TATATGEVHE RDDDSCGVYL TWKEEPVVWV SAWKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-139GRAS family protein