PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022992237.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 497aa MW: 54222.8 Da PI: 8.8161

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022992237.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	92	114	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022992237.1 92 FVCEICNKGFQRDQNLQLHRRGH 114 89*******************88 PP
2	zf-C2H2	11.2	0.0011	169	191	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_022992237.1 169 WKCDKCSKKYAVQSDWKAHSKIC 191 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MMMKGNFLSQ QQQQHQHQVL MDENLSNLTS ASGEATASVS SANHYLAPQS QHPQPPPPPP 60 PPKKKRNLPG NPDPDAEVIA LSPRTLMATN RFVCEICNKG FQRDQNLQLH RRGHNLPWKL 120 KQRSNKEVVK KKVYVCPESS CVHHDPSRAL GDLTGIKKHF YRKHGEKKWK CDKCSKKYAV 180 QSDWKAHSKI CGTKEYRCDC GTLFSRRDSF ITHRAFCDAL ADESARSAMA LNPIMSSYNN 240 NNNNNFVIKR DFSNSNNMRA EIPPWLHSND LRGEIFIGSC QDEHPHQNHE TLNPNGHGHG 300 HGHGCGASIG LPPPSSYQCS SVSSPHISAT ALLQKAAQMG ATMSSTTTTS GSMQRPHKMV 360 HVSTGDYGHI GGGAVSCSSS CTDYGHKAAA VSASEPATFL HDMINSLSSA SASHPFLQDS 420 SFNDVTAFPA MHHHIVPATA TTTVTAASGG RSDGLTRDFL GLRPLSHGDI LSLTGFGNCI 480 VPNSSNLQSQ IQKPWQG

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MMMKGNFLSQ QQQQHQHQVL MDENLSNLTS ASGEATASVS SANHYLAPQS QHPQPPPPPP  60
PPKKKRNLPG NPDPDAEVIA LSPRTLMATN RFVCEICNKG FQRDQNLQLH RRGHNLPWKL  120
KQRSNKEVVK KKVYVCPESS CVHHDPSRAL GDLTGIKKHF YRKHGEKKWK CDKCSKKYAV  180
QSDWKAHSKI CGTKEYRCDC GTLFSRRDSF ITHRAFCDAL ADESARSAMA LNPIMSSYNN  240
NNNNNFVIKR DFSNSNNMRA EIPPWLHSND LRGEIFIGSC QDEHPHQNHE TLNPNGHGHG  300
HGHGCGASIG LPPPSSYQCS SVSSPHISAT ALLQKAAQMG ATMSSTTTTS GSMQRPHKMV  360
HVSTGDYGHI GGGAVSCSSS CTDYGHKAAA VSASEPATFL HDMINSLSSA SASHPFLQDS  420
SFNDVTAFPA MHHHIVPATA TTTVTAASGG RSDGLTRDFL GLRPLSHGDI LSLTGFGNCI  480
VPNSSNLQSQ IQKPWQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	1e-104	C2H2 family protein