PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022992042.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 478aa MW: 52069.1 Da PI: 9.4869

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022992042.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	60	82	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022992042.1 60 FVCEICNKGFQRDQNLQLHRRGH 82 89*******************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MFSPTIMSNS TSLSDQATIF SNIHHPPQKL KKKRSLPGNP DPDAEVIALS PTTLLATNRF 60 VCEICNKGFQ RDQNLQLHRR GHKLPWKLKQ RSSKEVKKKA YVCPEEACVH HNPSRALGDL 120 TGIKKHYSRK HGEKKWKCLK CSKLYAVQSD WKAHSKTCGT REYRCDCGTL FSRKDRFVTH 180 RAFCDALAEE SARLSANQLA IASAASGAMG VDVNLSSTTV AQSLFPFGNH YQFSNSLIPS 240 SPSSLSLSSS QTLVSLNPWN HPLNPNHTLQ MIKPEDSNSH HFHQIPNLPL SDDSSNNNNY 300 HPFGLIQDHH HKASSSSSSS SSMITSPFRN LHVSVQPASN AATSAHLSAT ALLQKAATVG 360 VGVGAAKSGQ HQPESAGHIT HFNIPEFRPS NHISSLSQLG PDYATWQKSD RLTRDFLGLT 420 GHGNGTGSGS GSGGSVHFSM IVKDMLMYAD GKPHNNNNNS SNGFGYGEAA ANGTWEDC

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MFSPTIMSNS TSLSDQATIF SNIHHPPQKL KKKRSLPGNP DPDAEVIALS PTTLLATNRF  60
VCEICNKGFQ RDQNLQLHRR GHKLPWKLKQ RSSKEVKKKA YVCPEEACVH HNPSRALGDL  120
TGIKKHYSRK HGEKKWKCLK CSKLYAVQSD WKAHSKTCGT REYRCDCGTL FSRKDRFVTH  180
RAFCDALAEE SARLSANQLA IASAASGAMG VDVNLSSTTV AQSLFPFGNH YQFSNSLIPS  240
SPSSLSLSSS QTLVSLNPWN HPLNPNHTLQ MIKPEDSNSH HFHQIPNLPL SDDSSNNNNY  300
HPFGLIQDHH HKASSSSSSS SSMITSPFRN LHVSVQPASN AATSAHLSAT ALLQKAATVG  360
VGVGAAKSGQ HQPESAGHIT HFNIPEFRPS NHISSLSQLG PDYATWQKSD RLTRDFLGLT  420
GHGNGTGSGS GSGGSVHFSM IVKDMLMYAD GKPHNNNNNS SNGFGYGEAA ANGTWEDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-106	C2H2 family protein