PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991584.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 353aa MW: 38441.3 Da PI: 5.3488

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991584.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	85.9	4.8e-27	41	135	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe+l+Li++++ e+r+r g+ + +p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e++ +++++s +++ ++l+ XP_022991584.1 41 RWTRQEILVLIQGKKVAETRVRGGRaaslafgsaQVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWESQIREDTESFWVMRNDLR 135 8*******************76555666666699******************************************999999999999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MALQQLSLGP APLDAVTNGV DVRPMSIDGG DDATKTPRLP RWTRQEILVL IQGKKVAETR 60 VRGGRAASLA FGSAQVEPKW ASVSSYCKRH GVNRGPVQCR KRWSNLAGDF KKIKEWESQI 120 REDTESFWVM RNDLRRERKL PGFFDKEVYD ILDSGPAPSP SPALALALAP APPPALNSDE 180 VKPDAEPEHV FDSSKIATVD DGLFSDFEQD ETSRSPMKEV AGKEVPAPTA DGAIPAPTPL 240 SEKLYQPAAQ DCPVQGTSND REAAAAANPG IGSTSSQEGR KRKHVALDVD EETMVQNELI 300 GILEKNGKLL SAQLEAQNMN FELDREQRKH HADGLVAVLN KLADALGRIA DKL

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MALQQLSLGP APLDAVTNGV DVRPMSIDGG DDATKTPRLP RWTRQEILVL IQGKKVAETR  60
VRGGRAASLA FGSAQVEPKW ASVSSYCKRH GVNRGPVQCR KRWSNLAGDF KKIKEWESQI  120
REDTESFWVM RNDLRRERKL PGFFDKEVYD ILDSGPAPSP SPALALALAP APPPALNSDE  180
VKPDAEPEHV FDSSKIATVD DGLFSDFEQD ETSRSPMKEV AGKEVPAPTA DGAIPAPTPL  240
SEKLYQPAAQ DCPVQGTSND REAAAAANPG IGSTSSQEGR KRKHVALDVD EETMVQNELI  300
GILEKNGKLL SAQLEAQNMN FELDREQRKH HADGLVAVLN KLADALGRIA DKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-116	Trihelix family protein