PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022991519.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 572aa    MW: 65177.5 Da    PI: 4.8311
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022991519.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS274.43.4e-842095702374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++L+++Ae vs ++ e+a++lL+r +  asp+g+++qRl++yf++AL++r++r  ++     ++ ++++ +++ +l al+ f ++ P+ ++ hl
  XP_022991519.1 209 AHVLFAAAEKVSYQQYERASRLLQRCEWAASPSGNTVQRLVFYFAKALRKRINR--ETGR---ETIKEPKVDEVMSLEALRGFMKL-PFQQVMHL 297
                     799***************************************************..2222...23333333467777788889885.******** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     ta qaI e v+  ++vH iD++i  G++W a++++L + +++ p   l+iT+v+s   ++ + +e++g+ L+++Ae+l++pf+f++++++++ +l
  XP_022991519.1 298 TAVQAIFEHVKLITKVHLIDLEIRSGVHWSAFMKSLEDLKDELPikLLKITAVVS---DKGHLIEQVGKWLENVAESLNIPFSFKAILVSDMMEL 389
                     *************************************8776655569********...578899******************************* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     + e ++++++E++a+ + l l ++  +++sle+    +++++++l+P ++vv+e ea++n +sF++rf+e+l + ++ fd+l++ + ++++ r+k
  XP_022991519.1 390 KEELFETEEHEMVAIYSPLVLRTMITRPASLEN----LMRVIRKLNPSIMVVSEIEANYNLSSFVNRFIESLFFTASYFDCLKTCIEEDEDSRRK 480
                     *********************************....********************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +E    g+ i+nvva eg++r+ r  + e Wre ++++ +++++ls++  +qak + + ++ ++  ++e+++++l+ gWk+ p++svSaWr
  XP_022991519.1 481 IEGL-CGEGIENVVASEGSDRVVRSVKIEVWREFFGRFRMEEMELSDSCLSQAKFVAKGFAyGKFCSLEKNQKCLIVGWKETPIISVSAWR 570
                     **98.9*******************************************************88889************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    
MADDFFPFTP FDFNGSLAGT FFPSNGIHQN QETELRGKED DCPFGELGDF NFVSPDQSGF  60
YQQDILKIGN ETDYPQPNSD CLILNEILFG IGNDFTLSEL IQEKSKISDN LNADSISIQV  120
LNPCLESLQL LNSYGAKVKR MKGTNLEKRG GEASEENKSL STEEILRVAG ARYVHFFPEG  180
HDEFYMPMHP CDFALAGLSV DERNDVELAH VLFAAAEKVS YQQYERASRL LQRCEWAASP  240
SGNTVQRLVF YFAKALRKRI NRETGRETIK EPKVDEVMSL EALRGFMKLP FQQVMHLTAV  300
QAIFEHVKLI TKVHLIDLEI RSGVHWSAFM KSLEDLKDEL PIKLLKITAV VSDKGHLIEQ  360
VGKWLENVAE SLNIPFSFKA ILVSDMMELK EELFETEEHE MVAIYSPLVL RTMITRPASL  420
ENLMRVIRKL NPSIMVVSEI EANYNLSSFV NRFIESLFFT ASYFDCLKTC IEEDEDSRRK  480
IEGLCGEGIE NVVASEGSDR VVRSVKIEVW REFFGRFRME EMELSDSCLS QAKFVAKGFA  540
YGKFCSLEKN QKCLIVGWKE TPIISVSAWR FL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.12e-47GRAS family protein