PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991470.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 1057aa MW: 117575 Da PI: 9.7934

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991470.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	17.4	7.7e-06	69	125	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + +s++e +e+++ g++ +qV+ +F +R + +k XP_022991470.1 69 KRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVAQVRDFFNSQRSRVRK 125 799**************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1057 aa Download sequence
MEVLKDDLSN LEIGNSAESF QKFLDSQKDL FRSQVDQLQR IVVTQCKLTG VNPLSQEMAA 60 GALSITIGKR PRDLLNPKAV KYMQTVFSIK DALSKKESRE ISALFGVKVA QVRDFFNSQR 120 SRVRKLVRLS REKSIQSSSC KQLEAGGIAI DNDPSMPIDA VPLNSAAVVP FNSDAPIQLN 180 SEAPVPLNID TPVPLNTIKP SNVDNGPSCS TQDSELSGID GIDKHFVQTI FSMMQKEETF 240 SGQVKLMEWI LQIQNSSVLC WFLTKGGAII LATWLSQAAA EEQTSLLHVI LEVFCHLPLH 300 KALPVHISAT LQSVNNLRFY RTSDISNRAR FLLSRWSKLL TRSQALKKPN GMKLLTNSQT 360 DTILKQSIGD IICDESWKLN IDVPENFSSS IVNVDNTRKL ESHQALKLLP ASADDLHRKN 420 VLGLSSSRFR ERRKIQMVEQ PEQKSTARNL QAPRTSPVSR GRPMSTDDIQ KAKMRAQFMQ 480 SKYGKTGSSN GRMKSENVNK PLPLVSGALS PAPKTSLHPK FEDQKKAMVL SPKISNKVET 540 PLHSKIEVGF KDSLGEKCKR VQIQWRMPPE MKHNDLWRVG GGENSKEAGF QNIRNSREKE 600 TFYQTILDIP SNPKEPWDLE MDYDDSLTPE VLTEQLPDNE SSETEVRNHV VDAAVPSEVI 660 SSQDPKPNAD EPDLELLAVL LKNPELVYAL TSSQAGNLPA EETVKLLDMI KASGASNLGS 720 VNRMEKAVEK VEVSLPSPTP SSNAGTSGWK PAALRNPFSQ RDSIAESRVA LASPPVDASS 780 IAVSRVPNQQ HAAMPSVSHQ LPASVSQFSL PQTMINGRQS HHIVHSHQHQ QVIVNPPNVQ 840 LPNPEIGLAL RSFPITNEPL VNQLTAAVSS VRVEGGNVVK PVTFASNIPE RVPISFHSPP 900 SPTPTRMPLI QQQRQQSQIQ PFRSEHPHQT RVNISLPPSE KSAPSLGSWK PRQQDIGSHY 960 NSGTNQRNDR KFVGESMTAR GGPSWGRNEF ESWSPENSPV RTQEYSRLDK SISEPRTNSG 1020 RSYGPADQQQ RQRSPYGYQE QNRHGTNNNR RWRDRQF

Sequence ? help Back to Top

Protein Sequence Length: 1057 aa Download sequence

MEVLKDDLSN LEIGNSAESF QKFLDSQKDL FRSQVDQLQR IVVTQCKLTG VNPLSQEMAA  60
GALSITIGKR PRDLLNPKAV KYMQTVFSIK DALSKKESRE ISALFGVKVA QVRDFFNSQR  120
SRVRKLVRLS REKSIQSSSC KQLEAGGIAI DNDPSMPIDA VPLNSAAVVP FNSDAPIQLN  180
SEAPVPLNID TPVPLNTIKP SNVDNGPSCS TQDSELSGID GIDKHFVQTI FSMMQKEETF  240
SGQVKLMEWI LQIQNSSVLC WFLTKGGAII LATWLSQAAA EEQTSLLHVI LEVFCHLPLH  300
KALPVHISAT LQSVNNLRFY RTSDISNRAR FLLSRWSKLL TRSQALKKPN GMKLLTNSQT  360
DTILKQSIGD IICDESWKLN IDVPENFSSS IVNVDNTRKL ESHQALKLLP ASADDLHRKN  420
VLGLSSSRFR ERRKIQMVEQ PEQKSTARNL QAPRTSPVSR GRPMSTDDIQ KAKMRAQFMQ  480
SKYGKTGSSN GRMKSENVNK PLPLVSGALS PAPKTSLHPK FEDQKKAMVL SPKISNKVET  540
PLHSKIEVGF KDSLGEKCKR VQIQWRMPPE MKHNDLWRVG GGENSKEAGF QNIRNSREKE  600
TFYQTILDIP SNPKEPWDLE MDYDDSLTPE VLTEQLPDNE SSETEVRNHV VDAAVPSEVI  660
SSQDPKPNAD EPDLELLAVL LKNPELVYAL TSSQAGNLPA EETVKLLDMI KASGASNLGS  720
VNRMEKAVEK VEVSLPSPTP SSNAGTSGWK PAALRNPFSQ RDSIAESRVA LASPPVDASS  780
IAVSRVPNQQ HAAMPSVSHQ LPASVSQFSL PQTMINGRQS HHIVHSHQHQ QVIVNPPNVQ  840
LPNPEIGLAL RSFPITNEPL VNQLTAAVSS VRVEGGNVVK PVTFASNIPE RVPISFHSPP  900
SPTPTRMPLI QQQRQQSQIQ PFRSEHPHQT RVNISLPPSE KSAPSLGSWK PRQQDIGSHY  960
NSGTNQRNDR KFVGESMTAR GGPSWGRNEF ESWSPENSPV RTQEYSRLDK SISEPRTNSG  1020
RSYGPADQQQ RQRSPYGYQE QNRHGTNNNR RWRDRQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	0.0	HB-other family protein