PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022990771.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 643aa    MW: 70697 Da    PI: 5.025
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022990771.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS446.81.4e-1362816421374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv+lLl+cAeav+++d  la+++L +l+  ++p gd+mqR+a++fteAL+arla  + +++k ++p +  +kns e l+++++ ++++P++kf+h
  XP_022990771.1 281 LVHLLLACAEAVAKEDYMLARRYLHHLNRVVTPIGDSMQRVASCFTEALSARLAA-TFTTAKPISPIPPFPKNSLEILKIYQIVYQACPYVKFAH 374
                     68****************************************************9.77788888888888899********************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaI ea+e eervH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvg+      ++++etg+ L+++A++l+vpfef++ + ++le+l+
  XP_022990771.1 375 FTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGSPFLRITGVGP----VIDAVQETGRCLTELAHSLNVPFEFHA-IGEQLEALK 464
                     ******************************************************....99*************************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +++++ + gEalaVn+v +lhr++    sl +    +L ++++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p+es +r+kv
  XP_022990771.1 465 PNMFNRRVGEALAVNVVNRLHRVP--GKSLGN----LLAMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPQESAQRAKV 553
                     ***********************9..455555....*********************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+ ++++ei+n+vacegaer+erhe+l+kWr+ +e+ GFk v+ls++a++q k ll  ++ dgyr+ e++g+l+lgW+dr+L+++SaWr
  XP_022990771.1 554 EQYIFAPEIRNIVACEGAERIERHERLGKWRKLMETKGFKGVALSSNAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRALIAASAWR 642
                     ****************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 643 aa     Download sequence    
MINSLCGSIG PSNSTETSSS SKPPPPTSPN EAVSSSDLEP SSLSFPAPKF EIDGDIEIQS  60
PDNSVWDSLF ADQLDCDFMI SSPVRSLPSP HNLGFNYSNY NYGQAMQCSP PRSCSQVGAS  120
SSVHKGKGLS PLHKVFSSSS NQYMQAIEGT SSLPTIGELL DDYEEPEGFE TFQNLSKISG  180
IGESLQFYDI STSSLPPVFE DLAVPNESST MDREFYTQIG SITTASLPQQ DQQHQPPPPP  240
PPELSPLPLP PPKQPQNQLN HSLMVPLPVG SEQEQDSGLQ LVHLLLACAE AVAKEDYMLA  300
RRYLHHLNRV VTPIGDSMQR VASCFTEALS ARLAATFTTA KPISPIPPFP KNSLEILKIY  360
QIVYQACPYV KFAHFTANQA IFEAFEAEER VHVIDLDILQ GYQWPAFMQA LAARPGGSPF  420
LRITGVGPVI DAVQETGRCL TELAHSLNVP FEFHAIGEQL EALKPNMFNR RVGEALAVNV  480
VNRLHRVPGK SLGNLLAMIR DQAPNIVTLV EQEASHNGPY FLGRFLEALH YYSAIFDSLD  540
ATFPQESAQR AKVEQYIFAP EIRNIVACEG AERIERHERL GKWRKLMETK GFKGVALSSN  600
AVTQSKILLG LYSCDGYRLT EDKGCLLLGW QDRALIAASA WRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-102GRAS family protein