PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022990368.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 428aa MW: 49573.3 Da PI: 6.2394

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022990368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	77.8	1.7e-24	102	198	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt+++v++Li+a++++++++ ++ +kk++W+ sk+m+erg+++sp+qC++k+++lnkryk+++++ +++ t++++++ +++d XP_022990368.1 102 KWTDKMVKLLITAVSYIGDDIASDYegggrrkfqiiQKKGKWKLMSKVMAERGYQVSPQQCEDKFNDLNKRYKRLNDMIGRGtTCQVVENPALLD 196 7************999999986445566778899*******************************************97799999998887 PP trihelix 84 ql 85 + XP_022990368.1 197 VI 198 66 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MEGSLSQEGL IPGGASYGGP DLQGSFKVHN QAQHHHLQTH QGSSVNPSIQ EGFLLLQNCD 60 HTMSLVDYSK GDRCKNSQSD DEPSFNEDGI EGKKGSMWHR VKWTDKMVKL LITAVSYIGD 120 DIASDYEGGG RRKFQIIQKK GKWKLMSKVM AERGYQVSPQ QCEDKFNDLN KRYKRLNDMI 180 GRGTTCQVVE NPALLDVIDY LTDKEKDDVR KILNSKQLFY EEMCSYHNLN RLHLPHDPAL 240 QRSLQLACRV RDDHDYDEPR RHQNDDFDEN EHGETDEHDD FEENFAPYGD DTLSLGGSVK 300 RLRRGQDFDD AHACGNSLNS LDCNRGSHAY SQTQFAQGDI YHLETESMKG SSSQKQWMEL 360 RLLQLEDQKL QTRVEMLELE KQKFKWERVN KKKDRELEKM RMINERMKLE NERVALDIKQ 420 KEIGSRIH

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MEGSLSQEGL IPGGASYGGP DLQGSFKVHN QAQHHHLQTH QGSSVNPSIQ EGFLLLQNCD  60
HTMSLVDYSK GDRCKNSQSD DEPSFNEDGI EGKKGSMWHR VKWTDKMVKL LITAVSYIGD  120
DIASDYEGGG RRKFQIIQKK GKWKLMSKVM AERGYQVSPQ QCEDKFNDLN KRYKRLNDMI  180
GRGTTCQVVE NPALLDVIDY LTDKEKDDVR KILNSKQLFY EEMCSYHNLN RLHLPHDPAL  240
QRSLQLACRV RDDHDYDEPR RHQNDDFDEN EHGETDEHDD FEENFAPYGD DTLSLGGSVK  300
RLRRGQDFDD AHACGNSLNS LDCNRGSHAY SQTQFAQGDI YHLETESMKG SSSQKQWMEL  360
RLLQLEDQKL QTRVEMLELE KQKFKWERVN KKKDRELEKM RMINERMKLE NERVALDIKQ  420
KEIGSRIH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-156	Trihelix family protein