PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022990350.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 304aa    MW: 32928.6 Da    PI: 6.6814
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022990350.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.00018114136123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C+ C++ Fs++  L  H++ H
  XP_022990350.1 114 FSCNFCKREFSTSQALGGHQNAH 136
                     89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MAETGKDNHN SPSEASSISA ASDGGGGSPV TMKMEMIVAD EINGGDRQLQ ESNSRLLLDL  60
KLSNNEESGD GSPEILNSKR IVSSSSPAAA ATVDSSSSQG HANELSSNSK ARVFSCNFCK  120
REFSTSQALG GHQNAHKQER AMAKRRQGME LGSGNNVVGP PYLTSYYNPY STLSPHPLYG  180
SSLGKSLGIR MDSMIHKPSS YRWLGSPALQ FHGGVDSGWA SRPVMVTNNN NNSKLSTFER  240
LKMEGIQIHN GGFRLSTAMN AESIRRFDED RPILVPNLNL SESLVLKMDH HVEDSDEVDL  300
TLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.15e-22C2H2 family protein