PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022990199.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 1506aa MW: 167527 Da PI: 6.7583

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022990199.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0015	1391	1416	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ykC C +sF +k +L H r+ + XP_022990199.1 1391 YKCDleGCRMSFETKVELALHKRNqC 1416 99********************9876 PP
2	zf-C2H2	11.2	0.0012	1474	1500	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 ykC+ Cg sF+ s++ rH r+ H XP_022990199.1 1474 YKCKveGCGLSFRFVSDYSRHRRKtgH 1500 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1506 aa Download sequence
MGGVEIPKWL KGLPLAPEFR PTDTEFADPI AYISKIEKEA SAFGICKIIP PFPKPSKKYV 60 ITNLNKSLSR SSELSRDLNA SNVRSSSKLG STDGANEREV RAVFTTRHQE LGQSVRKTKG 120 VVQNPQFGVH KQVWQSGEVY TLEQFESKSK VFARSVLGGI KEPSPLVVES LFWKAATEKP 180 IYVEYANDVP GSAFGEPEGK FRYFHRRRRK RNYYNRKERS SELKSGEMET LAETLARDSR 240 GTSTRDNLNT SAEMLKPSTS TVSSEDASHN SRGKSSDSCI NMEGTAGWRL SNSPWNLQVI 300 ARSPGSLTRY MPDDIPGVTS PMVYIGMLFS WFAWHVEDHE LHSMNFLHVG SPKTWYSIPG 360 DHAFAFEEVV RTQAYGGSVD HLAALTLLGE KTSLLSPKTV IASGIPCCRL IQNPGEFVVT 420 FPRAYHVGFS HGFNCGEAAN FGTPQWLSVA KDAAVRRAAM NYLPMLSHQQ LLYLLTMSFV 480 SRVPRSLLPG VRSSRLRDRQ KEEREFMVKK GFVEDILREN NMLSVLLEKE SSCRAVLWNP 540 DMLPYLSNSQ VANTNSAVAT SPRENTSCNH IENLDRNDKS VQNFIDEMAL DLESMNDIYL 600 DSDDLSCDFQ VDSGTLACVA CGILGFPFMS VVQPSEKASR ELSGDHLSTH KRGGVLGSKD 660 VHCSPHFDGT HPEDSTSVPD VNCLSKDPSV GSVPKFDKGW NTFSKFLRPR SFCLLHAVDT 720 VELLQKKGGA NILVICHSDY HKIKANAVAI AEEIGHNFVY NEVRLDIASE EDLGLIDLAI 780 DEERDECRED WTSRLGINLR HCVKVRKSSP TKQVQHALAL GGLFLNRDHG FDLSNLNWPA 840 KRSRSKKINH LQHSKRFQSM HLKEEVSGEK SDSRIAKQQE KFFQYYRRNK KSGNSTGVSS 900 VTQPASSGDS SDLCNDRSFR SNASELAIPD PTGTPDQQDA VLQDCGNTNS ISTVGRMTEP 960 QMENCLPEEA YIDGELPVDD SGMQQNITTA LDTSERNKKA VLPTCTVGPL VNSINESLEI 1020 PQDQELLESR NKTDQECDIA SEEQSHAPAG VCSDEVNLAE STGLHRSIVL ESSKVVLDSE 1080 DVKNSSSEAC DGMTRDETAI ADGIKGMAED SCSLIPIKLH LCPDTEGHSQ FGHLDDRINT 1140 GTPDAATSNL RDRTSEVSKM ACEGPDLCNA VTSDGLLNNL QTFGADVETR SVSGVEVQLK 1200 AQLSSCLADE KSIKNLGSQE DVDNLSDALM SSTGVQNETP TEPRTPMDEP GFKSCILGES 1260 PMDVETGGDA SDRKNLTGGK SPGIDSPLTQ SKTRDATEIC SSKHQPSSDV EKQRKRKRHD 1320 ELRIENELSS YDFIRSPCEG LRPRAIKNLT HQRDTDVNIS VQEKPERKRV RKPSDNVPPK 1380 PKKEIRRKGS YKCDLEGCRM SFETKVELAL HKRNQCPHEG CGKRFSSHKY AMLHQRVHDD 1440 DRPLKCPWKG CSMSFKWAWA RTEHIRVHTG ERPYKCKVEG CGLSFRFVSD YSRHRRKTGH 1500 YVDQPS

Sequence ? help Back to Top

Protein Sequence Length: 1506 aa Download sequence

MGGVEIPKWL KGLPLAPEFR PTDTEFADPI AYISKIEKEA SAFGICKIIP PFPKPSKKYV  60
ITNLNKSLSR SSELSRDLNA SNVRSSSKLG STDGANEREV RAVFTTRHQE LGQSVRKTKG  120
VVQNPQFGVH KQVWQSGEVY TLEQFESKSK VFARSVLGGI KEPSPLVVES LFWKAATEKP  180
IYVEYANDVP GSAFGEPEGK FRYFHRRRRK RNYYNRKERS SELKSGEMET LAETLARDSR  240
GTSTRDNLNT SAEMLKPSTS TVSSEDASHN SRGKSSDSCI NMEGTAGWRL SNSPWNLQVI  300
ARSPGSLTRY MPDDIPGVTS PMVYIGMLFS WFAWHVEDHE LHSMNFLHVG SPKTWYSIPG  360
DHAFAFEEVV RTQAYGGSVD HLAALTLLGE KTSLLSPKTV IASGIPCCRL IQNPGEFVVT  420
FPRAYHVGFS HGFNCGEAAN FGTPQWLSVA KDAAVRRAAM NYLPMLSHQQ LLYLLTMSFV  480
SRVPRSLLPG VRSSRLRDRQ KEEREFMVKK GFVEDILREN NMLSVLLEKE SSCRAVLWNP  540
DMLPYLSNSQ VANTNSAVAT SPRENTSCNH IENLDRNDKS VQNFIDEMAL DLESMNDIYL  600
DSDDLSCDFQ VDSGTLACVA CGILGFPFMS VVQPSEKASR ELSGDHLSTH KRGGVLGSKD  660
VHCSPHFDGT HPEDSTSVPD VNCLSKDPSV GSVPKFDKGW NTFSKFLRPR SFCLLHAVDT  720
VELLQKKGGA NILVICHSDY HKIKANAVAI AEEIGHNFVY NEVRLDIASE EDLGLIDLAI  780
DEERDECRED WTSRLGINLR HCVKVRKSSP TKQVQHALAL GGLFLNRDHG FDLSNLNWPA  840
KRSRSKKINH LQHSKRFQSM HLKEEVSGEK SDSRIAKQQE KFFQYYRRNK KSGNSTGVSS  900
VTQPASSGDS SDLCNDRSFR SNASELAIPD PTGTPDQQDA VLQDCGNTNS ISTVGRMTEP  960
QMENCLPEEA YIDGELPVDD SGMQQNITTA LDTSERNKKA VLPTCTVGPL VNSINESLEI  1020
PQDQELLESR NKTDQECDIA SEEQSHAPAG VCSDEVNLAE STGLHRSIVL ESSKVVLDSE  1080
DVKNSSSEAC DGMTRDETAI ADGIKGMAED SCSLIPIKLH LCPDTEGHSQ FGHLDDRINT  1140
GTPDAATSNL RDRTSEVSKM ACEGPDLCNA VTSDGLLNNL QTFGADVETR SVSGVEVQLK  1200
AQLSSCLADE KSIKNLGSQE DVDNLSDALM SSTGVQNETP TEPRTPMDEP GFKSCILGES  1260
PMDVETGGDA SDRKNLTGGK SPGIDSPLTQ SKTRDATEIC SSKHQPSSDV EKQRKRKRHD  1320
ELRIENELSS YDFIRSPCEG LRPRAIKNLT HQRDTDVNIS VQEKPERKRV RKPSDNVPPK  1380
PKKEIRRKGS YKCDLEGCRM SFETKVELAL HKRNQCPHEG CGKRFSSHKY AMLHQRVHDD  1440
DRPLKCPWKG CSMSFKWAWA RTEHIRVHTG ERPYKCKVEG CGLSFRFVSD YSRHRRKTGH  1500
YVDQPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1366	1373	ERKRVRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein