PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022990192.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 607aa    MW: 66521 Da    PI: 5.1127
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022990192.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS451.36.1e-1382335991374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++L++cAeav++++++ a+al++++  la +++ +m+++a+yf+eALa+r++r    +y+      +s    s+ l++   f+e++P+lkf+h
  XP_022990192.1 233 LVHTLMACAEAVQQENMKIAEALVKHIGLLAVSQAGAMRKVATYFAEALARRIYR----IYSPQDGFYSS---YSDILQM--HFYETCPYLKFAH 318
                     689****************************************************....77544444443...4444443..5************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +taNqaIlea+++++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp++R+Tg+g+p++g  +++l+++g++La++Ae++gv+fefn +v+++l++l
  XP_022990192.1 319 FTANQAILEAFATASRVHVIDFSLNQGMQWPALMQALALRPGGPPTFRLTGIGPPKQGnTADSLQQVGWKLAQMAEAIGVEFEFNHIVCSNLANL 413
                     ********************************************************99999********************************** PP

            GRAS 190 eleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres..e 280
                     ++ +L+++    Ea+aVn+v+ lhrll++++++e+    vL  +k ++Pk+v++veqea+hn+  F++rf+eal+yys +fdsle++    +  +
  XP_022990192.1 414 NPAALEIRLasVEAVAVNSVFDLHRLLARPGAIEK----VLGSIKATKPKIVTIVEQEANHNGRVFMDRFTEALHYYSNMFDSLEVSSTGFEpaS 504
                     ****9887666************************....*********************************************87754333459 PP

            GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     e++ +++++lgr+i+nvvaceg++r+erhe+l +Wr+r+++aGF+pv+l+++a kqa++ll+ ++ ++gyrvee++g+l+lgW++rpL+++SaW+
  XP_022990192.1 505 EDVLLSEVYLGRQICNVVACEGSDRVERHESLTQWRSRMKSAGFNPVHLGSNAFKQASMLLALFAgGEGYRVEENNGCLMLGWHTRPLIATSAWQ 599
                     9*********************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 607 aa     Download sequence    
MKMKRELEDD RSTGGGVYGG GRQGVGKGEC SSVLSGKVKM WEEEEQEVGG GMDELLAVLG  60
YKVRASDMAD VAQKMEQLEM VMGSVQEDGI SHLASDTVHY NPSDLSAWIQ NMLSEFNNTP  120
NHFNSSSTST PPQSSQYSNP HSRIQSRPSR LYDDDSEYDL SAIPGVAVFP SKDYSTEFET  180
NSRKRVKIEG ENSVNLLPPS PPFVAAAAAG IVSEPSRPVV VVEEGSQDAG IQLVHTLMAC  240
AEAVQQENMK IAEALVKHIG LLAVSQAGAM RKVATYFAEA LARRIYRIYS PQDGFYSSYS  300
DILQMHFYET CPYLKFAHFT ANQAILEAFA TASRVHVIDF SLNQGMQWPA LMQALALRPG  360
GPPTFRLTGI GPPKQGNTAD SLQQVGWKLA QMAEAIGVEF EFNHIVCSNL ANLNPAALEI  420
RLASVEAVAV NSVFDLHRLL ARPGAIEKVL GSIKATKPKI VTIVEQEANH NGRVFMDRFT  480
EALHYYSNMF DSLEVSSTGF EPASEDVLLS EVYLGRQICN VVACEGSDRV ERHESLTQWR  540
SRMKSAGFNP VHLGSNAFKQ ASMLLALFAG GEGYRVEENN GCLMLGWHTR PLIATSAWQL  600
DADESTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein