PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022989934.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRAS | ||||||||
Protein Properties | Length: 587aa MW: 65072.5 Da PI: 5.0987 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 452.1 | 3.5e-138 | 218 | 577 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 lv++L++cAeav++++l+la+al++r+ la +++ +m+++a++f+eALa+r++r +p ++ ++++s+ l+ f+e sP+lkf+h XP_022989934.1 218 LVHALMACAEAVQQNNLNLAEALVKRIGYLAVSQAGAMRKVATFFAEALARRIYR-------VCPENPL-DHSMSDMLQ--LHFYESSPYLKFAH 302 689****************************************************.......2233333.233444433..35************ PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190 +taNqaIlea+eg++rvH+iDf+++qG+QWpaLlqaLa Rp+gpp +R+Tg+g+p++++++ l+ +g++Lak+Ae+++v+fe++ +va++l+dl+ XP_022989934.1 303 FTANQAILEAFEGKKRVHVIDFSMNQGMQWPALLQALALRPSGPPAFRLTGIGPPAPDNSDYLQDVGWKLAKLAETINVEFEYRGFVANSLADLD 397 *********************************************************************************************** PP GRAS 191 leeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 ++L+++p E+++Vn+v++lh+ll++++++e+ v+++vk+++P++++vveqea+hn++ F++rf+e+l+yys+lfdsle++ +++++ XP_022989934.1 398 ASMLELRPseVESVVVNSVFELHKLLARPGAIEK----VMSVVKQMKPEIMTVVEQEANHNGPVFMDRFTESLHYYSTLFDSLESS---PNNQDK 485 ********88899*********************....**********************************************99...689999 PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 ++++++lg++i+nvvaceg++r+erhetl +Wr rl ++GF+p++l+++a kqa++ll+ ++ ++gyrvee++gsl+lgW++rpL+++SaW+ XP_022989934.1 486 MMSEMYLGKQICNVVACEGSDRVERHETLTQWRTRLCSSGFEPIHLGSNAFKQASMLLALFGsGEGYRVEENNGSLTLGWHTRPLIATSAWK 577 99*****************************************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 587 aa Download sequence |
MKREHHHLHP RPDPPSMAAA PNGDTYLNTG KAKLWEEDAQ LDGGMDELLA VLGYKVKSSD 60 MAEVAQKLEQ LEEAMCQVQD TGLSHLAFDT VHYNPSDLST WLESMITELH PPPSFPQPHP 120 SQMNDSSFLA PAESSTITSI DYDPQRQTSS LIFEESSSSD YDLKAITSSA IYSPRENKRL 180 KPSSESDSDL FSTSAIGASN SATRPIVLVD SQENGIQLVH ALMACAEAVQ QNNLNLAEAL 240 VKRIGYLAVS QAGAMRKVAT FFAEALARRI YRVCPENPLD HSMSDMLQLH FYESSPYLKF 300 AHFTANQAIL EAFEGKKRVH VIDFSMNQGM QWPALLQALA LRPSGPPAFR LTGIGPPAPD 360 NSDYLQDVGW KLAKLAETIN VEFEYRGFVA NSLADLDASM LELRPSEVES VVVNSVFELH 420 KLLARPGAIE KVMSVVKQMK PEIMTVVEQE ANHNGPVFMD RFTESLHYYS TLFDSLESSP 480 NNQDKMMSEM YLGKQICNVV ACEGSDRVER HETLTQWRTR LCSSGFEPIH LGSNAFKQAS 540 MLLALFGSGE GYRVEENNGS LTLGWHTRPL IATSAWKLGN NSVVVTH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01570.1 | 0.0 | GRAS family protein |