PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022989218.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | SBP | ||||||||
Protein Properties | Length: 190aa MW: 21306.2 Da PI: 9.3894 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.7 | 6.2e-42 | 67 | 144 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+e+C+adlseak yhrrhkvCevh+k++vvlv g +qrfCqqCsrfhelsefDe krsCrrrLa+hnerrrk +a XP_022989218.1 67 CCQAEKCTADLSEAKPYHRRHKVCEVHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEMKRSCRRRLAGHNERRRKISA 144 6**************************************************************************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MDVGKIETTH QQKQRVVMEK GRVKEDMVVV DEDGEYDEDK KRKGVIVSVG GGGSGKKAAG 60 GGGGMRCCQA EKCTADLSEA KPYHRRHKVC EVHAKSQVVL VGGFRQRFCQ QCSRFHELSE 120 FDEMKRSCRR RLAGHNERRR KISAESNAEC SIRKGTGAQM KDSVCGQADD QGRIQMTIQE 180 NAAYKHFQIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53160.1 | 2e-46 | SBP family protein |