PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022988865.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 293aa    MW: 33295.6 Da    PI: 8.7214
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022988865.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix48.52.3e-1519108185
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                     +Wt + + +L+ea  e++ +l+rg+l+ ++W+ev++++     +er+  r+++qCk++++ l+++yk +k++ ++   + +s +p+f+ l
  XP_022988865.1  19 CWTLDDTSTLVEAWGERHLDLNRGSLRYTHWQEVADAVnschnHERKSIRTAIQCKNRIDTLKRKYKIEKARIQESGGTYVSAWPFFSCL 108
                     7**********************************************************************99998889999*****877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MALSQPSPLA STFPVREDCW TLDDTSTLVE AWGERHLDLN RGSLRYTHWQ EVADAVNSCH  60
NHERKSIRTA IQCKNRIDTL KRKYKIEKAR IQESGGTYVS AWPFFSCLNS LIGNSHKSST  120
PAAVSYCKAL TATTPGMSLF PKIPVGPRSG TKKRSLSHVY GSFCNSHLSQ DLNSKDDEGK  180
DGMDSENHLS SPRFKDRDVG YRKLADAIGT IADIFERVEV AKQRHMVELE MQRMQFVKDL  240
EYQRMQLHME MHLQMQKIKC SRRDSGAGIK RMDSTGKSSL TWSSTNFEED CYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.13e-52Trihelix family protein