PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022988806.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GeBP | ||||||||
Protein Properties | Length: 403aa MW: 45670.3 Da PI: 5.1959 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 126.6 | 1.1e-39 | 180 | 274 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++rlwse+Dei++LqG+idf+ ++g++p++d+++f ef+kk++s++vsk+ql++K+rrLKkK++++++k ++g++p+f k+h++k+f lskkiWg XP_022988806.1 180 INRLWSEDDEISILQGMIDFQLEKGSDPYADMSQFLEFIKKNLSVDVSKNQLIDKVRRLKKKYRNNSEKGRNGDDPVFLKQHEHKSFVLSKKIWG 274 68********************************************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 403 aa Download sequence |
MAPKRLIDDL PSAHAVSDAE EESGFETLGE DPEINNLMQN SEDENEEQTY EDEEDEEDEE 60 EEEDEEHAIP SPIVSKREKS PEKDFGFVSD SDSEKTQSSP SASAFTIKSI LRKSAFGSSK 120 PKKGSHKSSI DCAIVKPVGS GSKRQIENNF HGNELNKKKI KRVINGEDIE EGKKVSGSGI 180 NRLWSEDDEI SILQGMIDFQ LEKGSDPYAD MSQFLEFIKK NLSVDVSKNQ LIDKVRRLKK 240 KYRNNSEKGR NGDDPVFLKQ HEHKSFVLSK KIWGNEAKKK PRKQSVKASN SVSISSPRVD 300 MEAAKKEALH VESKILPEEF LSEFPWLKAS IMVENDKFCS EGLMRLLRER MPSIGSEKAK 360 ELDEKWRKLG ESEVELYLKK VELVREQCKL ILDSMGKARR AAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 2e-28 | GeBP family protein |