PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022988122.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 424aa    MW: 47604.9 Da    PI: 6.4522
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022988122.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS395.94.3e-121464241341
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl+cA++v+ g+le a+ +L ++s+l s dgd+mqR+ ayf++ALa r+++++++lyka+++++ +   +see+ + klf+e++P+lk+++
  XP_022988122.1  46 LIHLLLTCANHVAVGSLESANLALDQISHLTSADGDTMQRIGAYFAKALADRILKTWPGLYKAFNSTKIP--MVSEEILVKKLFFETFPFLKVAF 138
                     689*************************************************************999998..69********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++NqaI+ea+ege++vHiiD++ ++ ++W+aL+q L++Rpegpp+lRiTgv++    +ke l +++ rL+++Ae+l++pf+fn  v +rledl+
  XP_022988122.1 139 VLTNQAIVEAMEGEKMVHIIDLNGNETTHWLALMQVLSARPEGPPHLRITGVHP----QKEILDQMAPRLTEVAEKLDIPFQFNS-VISRLEDLD 228
                     ******************************************************....9**************************.79******* PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll..............................................desvsleserdevLklvkslsPkvv 239
                     +e+Lrvk+gEala+n+vlqlh+ll                                              ++s++ + +++++L+ ++sl Pkv+
  XP_022988122.1 229 IEKLRVKTGEALAINSVLQLHTLLgsdevlqkpsssaaksanvvqysryslselldkdlvngcnpspdsvSSSANAT-KINRFLDGLWSLTPKVM 322
                     ******************************************************************98754444444.5999************* PP

            GRAS 240 vvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaa 334
                     +v+eq+++hn+++++er+leal++y+a+fd+le++++r+s er k+E++l+g+ei+n+++cegaer+erhe+ +kW +r++ aGF+ v+ls++ +
  XP_022988122.1 323 IVTEQDSNHNGSTLMERLLEALHTYAAIFDCLESNMSRTSVERLKLEKMLFGEEIKNIITCEGAERKERHEKHKKWCQRFDIAGFRHVSLSYYGM 417
                     *********************************************************************************************** PP

            GRAS 335 kqaklll 341
                      qa++ll
  XP_022988122.1 418 VQAQSLL 424
                     ****997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MIQDEGISTI TSTPLQFFTM MPLSPKLGSP YLWLRELKSE ERGLYLIHLL LTCANHVAVG  60
SLESANLALD QISHLTSADG DTMQRIGAYF AKALADRILK TWPGLYKAFN STKIPMVSEE  120
ILVKKLFFET FPFLKVAFVL TNQAIVEAME GEKMVHIIDL NGNETTHWLA LMQVLSARPE  180
GPPHLRITGV HPQKEILDQM APRLTEVAEK LDIPFQFNSV ISRLEDLDIE KLRVKTGEAL  240
AINSVLQLHT LLGSDEVLQK PSSSAAKSAN VVQYSRYSLS ELLDKDLVNG CNPSPDSVSS  300
SANATKINRF LDGLWSLTPK VMIVTEQDSN HNGSTLMERL LEALHTYAAI FDCLESNMSR  360
TSVERLKLEK MLFGEEIKNI ITCEGAERKE RHEKHKKWCQ RFDIAGFRHV SLSYYGMVQA  420
QSLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein