PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022987948.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 903aa MW: 100002 Da PI: 8.303

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022987948.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	68.6	1.2e-21	811	891	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e+++Li++r ++++r++ +k +++lWee+s m + g++rsp qCk+ w +l +++++ ++e+k s+++pyfd++ XP_022987948.1 811 KWKPEEIKKLIQLRGKLHDRFQVAKGRMALWEEISTSMLADGINRSPGQCKSLWASLVVKFEQESKSENK-----SKSWPYFDEMS 891 7****************************************************************998.....678****95 PP

Sequence ? help Back to Top
Protein Sequence Length: 903 aa Download sequence
MQLEFLGGSS VLSSPHSAPY KQRMASFGAL SLCPCSPLSR PHQTVRTITR CRGSPTVLGK 60 NVSKEHRKRP GRLEGAKRSM EDSVQRKMEQ FYEGSDGPPL RVLPIGGLGE IGMNCMLVGN 120 YDRYILIDAG VMFPDHDELG VQKIIPDTTF IRRWSHKIEA VVITHGHEDH IGALPWVIPA 180 LDSHTPIFAS SFTVELIKKR LKENGIFIPS RLKVFKMKRR FTAGPFEIEP IRVTHSIPDC 240 CGLVLRCADG TIFHTGDWKI DESPLDGKVF DRETLEQLSK EGVTLMMSDS TNVLSPGRTI 300 SESVVADALL RRISAAKGRV ITTQFASNIH RLGSVKAAAD LTGRKLVFVG MSLRTYLDAA 360 WKDGKAPIDP STLVKVEDID AYAPKDLLIV TTGSQAEPRA ALNLASYGSS HSLKLSKEDM 420 ILYSAKVIPG NESRVMKMLN RISEIGSNII MGKNELLHTS GHGYRGELEE VLQIVKPQHF 480 LPIHGELLFL KEHELLGRST GIRHTTVIKN GEMLGVSHLR NRRVLSNGFT SLGMENLQLK 540 YSDGDKAFGS SSELFVDERL KIATDGIIVV SMEILRPQSV DGLNETGIRG KLRITTRCLW 600 LDKGKLLDAL HKAAHAALSS CPVNCPLPHM ERTVSELLRK MVRKYSGKRP EVIVMAVENP 660 GGVLTEELGT RLSGKSNTGI GISAFRKAVD GQPTKSHLNS IKPNGNDDFH SEDNSSQESQ 720 GCIKPERLLP EEDYIPSNST EMNSFDNEGL EDFWRPFITP TSPANELAKD NEGSVQQSKN 780 TLEITNEGEE VSDDKSLKTS NSDVKPVKRN KWKPEEIKKL IQLRGKLHDR FQVAKGRMAL 840 WEEISTSMLA DGINRSPGQC KSLWASLVVK FEQESKSENK SKSWPYFDEM SGILSGSEDV 900 ATE

Sequence ? help Back to Top

Protein Sequence Length: 903 aa Download sequence

MQLEFLGGSS VLSSPHSAPY KQRMASFGAL SLCPCSPLSR PHQTVRTITR CRGSPTVLGK  60
NVSKEHRKRP GRLEGAKRSM EDSVQRKMEQ FYEGSDGPPL RVLPIGGLGE IGMNCMLVGN  120
YDRYILIDAG VMFPDHDELG VQKIIPDTTF IRRWSHKIEA VVITHGHEDH IGALPWVIPA  180
LDSHTPIFAS SFTVELIKKR LKENGIFIPS RLKVFKMKRR FTAGPFEIEP IRVTHSIPDC  240
CGLVLRCADG TIFHTGDWKI DESPLDGKVF DRETLEQLSK EGVTLMMSDS TNVLSPGRTI  300
SESVVADALL RRISAAKGRV ITTQFASNIH RLGSVKAAAD LTGRKLVFVG MSLRTYLDAA  360
WKDGKAPIDP STLVKVEDID AYAPKDLLIV TTGSQAEPRA ALNLASYGSS HSLKLSKEDM  420
ILYSAKVIPG NESRVMKMLN RISEIGSNII MGKNELLHTS GHGYRGELEE VLQIVKPQHF  480
LPIHGELLFL KEHELLGRST GIRHTTVIKN GEMLGVSHLR NRRVLSNGFT SLGMENLQLK  540
YSDGDKAFGS SSELFVDERL KIATDGIIVV SMEILRPQSV DGLNETGIRG KLRITTRCLW  600
LDKGKLLDAL HKAAHAALSS CPVNCPLPHM ERTVSELLRK MVRKYSGKRP EVIVMAVENP  660
GGVLTEELGT RLSGKSNTGI GISAFRKAVD GQPTKSHLNS IKPNGNDDFH SEDNSSQESQ  720
GCIKPERLLP EEDYIPSNST EMNSFDNEGL EDFWRPFITP TSPANELAKD NEGSVQQSKN  780
TLEITNEGEE VSDDKSLKTS NSDVKPVKRN KWKPEEIKKL IQLRGKLHDR FQVAKGRMAL  840
WEEISTSMLA DGINRSPGQC KSLWASLVVK FEQESKSENK SKSWPYFDEM SGILSGSEDV  900
ATE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein