PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022987947.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 904aa MW: 100150 Da PI: 8.303 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 68.6 | 1.2e-21 | 812 | 892 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e+++Li++r ++++r++ +k +++lWee+s m + g++rsp qCk+ w +l +++++ ++e+k s+++pyfd++ XP_022987947.1 812 KWKPEEIKKLIQLRGKLHDRFQVAKGRMALWEEISTSMLADGINRSPGQCKSLWASLVVKFEQESKSENK-----SKSWPYFDEMS 892 7******************************************************************998.....678******95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 904 aa Download sequence |
MQLEFLGGSS VLSSPHSAPY KQRMASFGAL SLCPCSPLSR PHQTVRTITR CRGSPTVLGK 60 NVSKEHRKRP GRLEGAKRSM EDSVQRKMEQ FYEGSDGPPL RVLPIGGLGE IGMNCMLVGN 120 YDRYILIDAG VMFPDHDELG VQKIIPDTTF IRRWSHKIEA VVITHGHEDH IGALPWVIPA 180 LDSHTPIFAS SFTVELIKKR LKENGIFIPS RLKVFKMKRR FTAGPFEIEP IRVTHSIPDC 240 CGLVLRCADG TIFHTGDWKI DESPLDGKVF DRETLEQLSK EGVTLMMSDS TNVLSPGRTI 300 SESVVADALL RRISAAKGRV ITTQFASNIH RLGSVKAAAD LTGRKLVFVG MSLRTYLDAA 360 WKDGKAPIDP STLVKVEDID AYAPKDLLIV TTGSQAEPRA ALNLASYGSS HSLKLSKEDM 420 ILYSAKVIPG NESRVMKMLN RISEIGSNII MGKNELLHTS GHGYRGELEE VLQIVKPQHF 480 LPIHGELLFL KEHELLGRST GIRHTTVIKN GEMLGVSHLR NRRVLSNGFT SLGMENLQLK 540 YSDGDKAFGS SSELFVDERL KIATDGIIVV SMEILRPQSV DGLNETGIRG KLRITTRCLW 600 LDKGKLLDAL HKAAHAALSS CPVNCPLPHM ERTVSELLRK MVRKYSGKRP EVIVMAVENP 660 GGVLTEELGT RLSGKSNTGI GISAFRKAVD GQPTKSHLNS IKPNGNDDFH SEDNSSQESQ 720 GFCIKPERLL PEEDYIPSNS TEMNSFDNEG LEDFWRPFIT PTSPANELAK DNEGSVQQSK 780 NTLEITNEGE EVSDDKSLKT SNSDVKPVKR NKWKPEEIKK LIQLRGKLHD RFQVAKGRMA 840 LWEEISTSML ADGINRSPGQ CKSLWASLVV KFEQESKSEN KSKSWPYFDE MSGILSGSED 900 VATE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G63420.1 | 0.0 | Trihelix family protein |