PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022987682.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 528aa    MW: 58089.6 Da    PI: 5.2866
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022987682.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS415.74e-1271505131374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselas..pdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                     lv+ L++cA+ ++ gd+ la +l  +++ l s  ++++ + ++a +f  AL +r++          p  +t++++  e+   ++ ++e++P+lkf
  XP_022987682.1 150 LVHMLVTCADSIHRGDFPLAGSLFVEMQSLLSgiNTDRGIGKVAGHFIDALTRRVFT---------PHDPTTTSTGYENELLYHHYYEACPYLKF 235
                     689************************999552244589*****************9.........66677777899999999************ PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +h+taNqaIlea++g+++vH+iDf++++GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++ +++l+e+g rLa++A++++v+f f+ ++a rled
  XP_022987682.1 236 AHFTANQAILEAFDGNDCVHVIDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNVRFAFRGVAAARLED 330
                     ***************************************************************************************9999**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++++L+v+p+E++aVn+v+qlhrll ++ + + + + vL  ++sl+Pk+++vveqeadhn++ Flerf+eal yys++fdslea    +  e+ 
  XP_022987682.1 331 VKPWMLQVSPKETVAVNSVMQLHRLLGNNNQFSYPLEMVLGWIRSLKPKIMTVVEQEADHNQTGFLERFTEALFYYSTMFDSLEACC--KMPEK- 422
                     *************************************************************************************96..44555. PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                        +++l+rei+nvv+ceg++r+erhe l kWr+rl++aGF++++l+++a kqa++ll  ++ +g++vee++g+l+lgW++rpL+++SaW+
  XP_022987682.1 423 AFAEMYLQREICNVVSCEGSARVERHEPLVKWRSRLHQAGFRALHLGSNAFKQASMLLTLFSAEGFSVEENEGCLTLGWHSRPLLAASAWQ 513
                     555667************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    
MDPFDSAASS GSSSGSSSST VTKPQDIDGL LAGAGYKVRS SDLHHVAQRL ERLESAMFNS  60
SSEISQLASD AVHYNPSDIA SWVDSILSEF NETASLPSDL SDFPDLFTVS NQTPGNVSWT  120
DPCVAAQHQN LALNQLTVVT AMEEDSGIKL VHMLVTCADS IHRGDFPLAG SLFVEMQSLL  180
SGINTDRGIG KVAGHFIDAL TRRVFTPHDP TTTSTGYENE LLYHHYYEAC PYLKFAHFTA  240
NQAILEAFDG NDCVHVIDFN LMHGLQWPAL IQALALRPGG PPLLRLTGIG PPSPDGRDSL  300
REIGLRLAEL ARSVNVRFAF RGVAAARLED VKPWMLQVSP KETVAVNSVM QLHRLLGNNN  360
QFSYPLEMVL GWIRSLKPKI MTVVEQEADH NQTGFLERFT EALFYYSTMF DSLEACCKMP  420
EKAFAEMYLQ REICNVVSCE GSARVERHEP LVKWRSRLHQ AGFRALHLGS NAFKQASMLL  480
TLFSAEGFSV EENEGCLTLG WHSRPLLAAS AWQAAPPPDA NQPFGETV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-129GRAS family protein