PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022987515.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Nin-like
Protein Properties Length: 306aa    MW: 34439.8 Da    PI: 4.9557
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022987515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK81.77.2e-26138188252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     +k++s e +s++F++pi++AAk+L+v+lT+LK++CR++GI+RWPhRk+ sl
  XP_022987515.1 138 TKTLSREAISEFFYMPITQAAKQLNVGLTLLKKRCRELGIRRWPHRKLMSL 188
                     799*********************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MGATWRPKCE AMAFEDPFPL SCHLSPLHCR TDNYSALDWN CNFGFPDTFF DVVPLLESCA  60
NNDSFFNPKD IDPISTFISE DGGVGIWSEF ESEAFGLEEG SGENGNGGMG NEGTMMRKAK  120
RKCCRETSNS SGSGSASTKT LSREAISEFF YMPITQAAKQ LNVGLTLLKK RCRELGIRRW  180
PHRKLMSLQT LIKNVKELQK EDGDQGVNKL SNVLKILENE KKLMEERPDL QLEDNTKRLR  240
QACFKANYKK RKLSGTNNGS QYFSINGGMI CRDDQEQGEE EEEDDEEMKY LLMGCSFSSS  300
IGSPLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.12e-51Nin-like family protein