PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022986993.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | YABBY | ||||||||
Protein Properties | Length: 154aa MW: 16791.9 Da PI: 10.2614 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 160.7 | 1.1e-49 | 1 | 134 | 23 | 160 |
YABBY 23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvir 117 +vsvP + +f++vtvrCGhC++llsvn+ ++q+l+ ++ + ++++ + ++++ s ++++s+s+ ++ +l ++ +++ r+pp ir XP_022986993.1 1 MVSVPCNNMFTLVTVRCGHCSNLLSVNMGASVQVLPPQDSQPGNKQQQVSGGDWSKDR--GSSSSSSSSSSKCTKIASL-DSAERDQHRIPP-IR 91 59***********************************997333333333333333333..3333333333333333333.344555566677.9* PP YABBY 118 PPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknW 160 PPek+qrvPsaynrfikeeiqrika+nPdishreafs+aakn XP_022986993.1 92 PPEKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNV 134 *****************************************95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 154 aa Download sequence |
MVSVPCNNMF TLVTVRCGHC SNLLSVNMGA SVQVLPPQDS QPGNKQQQVS GGDWSKDRGS 60 SSSSSSSSSK CTKIASLDSA ERDQHRIPPI RPPEKKQRVP SAYNRFIKEE IQRIKANNPD 120 ISHREAFSTA AKNVSSRTSC SCTKLRSESL KLLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G08465.1 | 8e-42 | YABBY family protein |