PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022986992.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | YABBY | ||||||||
Protein Properties | Length: 175aa MW: 19197.8 Da PI: 9.4988 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 186.6 | 1.3e-57 | 6 | 155 | 5 | 160 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 ++e+vCyv+CnfCntilavsvP + +f++vtvrCGhC++llsvn+ ++q+l+ ++ + ++++ + ++++ +s ++++s+s+ ++ XP_022986992.1 6 MAAERVCYVHCNFCNTILAVSVPCNNMFTLVTVRCGHCSNLLSVNMGASVQVLPPQDSQPGNKQQQVSGGDWSKDRGSSS--SSSSSSSKCTKIA 98 5789****************************************************973333333333333333333333..3333333333333 PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknW 160 +l ++ +++ r+pp ir +k+qrvPsaynrfikeeiqrika+nPdishreafs+aakn XP_022986992.1 99 SL-DSAERDQHRIPP-IR--QKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNV 155 33.344455566666.44..6**************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MSLEMMAAER VCYVHCNFCN TILAVSVPCN NMFTLVTVRC GHCSNLLSVN MGASVQVLPP 60 QDSQPGNKQQ QVSGGDWSKD RGSSSSSSSS SSKCTKIASL DSAERDQHRI PPIRQKKQRV 120 PSAYNRFIKE EIQRIKANNP DISHREAFST AAKNVSSRTS CSCTKLRSES LKLLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 4e-50 | YABBY family protein |