PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022986990.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | YABBY | ||||||||
Protein Properties | Length: 176aa MW: 19504.1 Da PI: 9.4174 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 226.1 | 9.4e-70 | 6 | 166 | 5 | 169 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 ++e+vCyv+CnfCntilavsvP + +f++vtvrCGhC++llsvn+ ++q+l+ ++ + ++++ + ++++ s ++++s+s+ ++ XP_022986990.1 6 MAAERVCYVHCNFCNTILAVSVPCNNMFTLVTVRCGHCSNLLSVNMGASVQVLPPQDSQPGNKQQQVSGGDWSKDR--GSSSSSSSSSSKCTKIA 98 5789***************************************************997333333333333333333..33333333333333333 PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 +l ++ +++ r+pp irPPek+qrvPsaynrfikeeiqrika+nPdishreafs+aaknWah+P+i g XP_022986990.1 99 SL-DSAERDQHRIPP-IRPPEKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNWAHYPHIRCG 166 33.344555566677.9*************************************************9876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 176 aa Download sequence |
MSLEMMAAER VCYVHCNFCN TILAVSVPCN NMFTLVTVRC GHCSNLLSVN MGASVQVLPP 60 QDSQPGNKQQ QVSGGDWSKD RGSSSSSSSS SSKCTKIASL DSAERDQHRI PPIRPPEKKQ 120 RVPSAYNRFI KEEIQRIKAN NPDISHREAF STAAKNWAHY PHIRCGQKVD GNKQTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G08465.1 | 7e-67 | YABBY family protein |