PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022986588.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 384aa MW: 43778.1 Da PI: 9.7534

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022986588.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60	5.8e-19	69	157	2	86
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W+ qe++ Li+a++ +eer ++++ + +W++v ++++++g++rs++qC++kw+nl ++ykk++e+e++ +++s ++p + ++e XP_022986588.1 69 WSLQETMILITAKKLDEERRNKAEqgtarkGSELRWKWVENYCWSQGCQRSQNQCNDKWDNLLRDYKKVREHESRA-CDQS-QIPSYWKME 157 ************99999997533333338899**************************************95.7666.899999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MSEPPTTSTE PPQQHQHQHQ HEQQKHPHHL LHLPLIHCGA STGTTARINA AAATSPSTVI 60 VREYRKGNWS LQETMILITA KKLDEERRNK AEQGTARKGS ELRWKWVENY CWSQGCQRSQ 120 NQCNDKWDNL LRDYKKVREH ESRACDQSQI PSYWKMEKHE RKDNNLPSNM AFEVYQALND 180 VVQRKLRGVS VAVVAGPPPP PSPTEGEAAA GTSSPAASES SSSSGREWGQ KKEKRERKRR 240 RVGRSIERSA SAVAQTLRTC EEQREIRHQQ LMEIKKQRLQ IQEARNHIQG QGIADLVAAV 300 ANLSGINNRS RRRRSEEYEC LYSGEEVRRL KEQNEAMQAE LSSVKTELSQ LRDQMPSLVR 360 TVMHNVMHNI PPPPSMDPGG DAYK

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MSEPPTTSTE PPQQHQHQHQ HEQQKHPHHL LHLPLIHCGA STGTTARINA AAATSPSTVI  60
VREYRKGNWS LQETMILITA KKLDEERRNK AEQGTARKGS ELRWKWVENY CWSQGCQRSQ  120
NQCNDKWDNL LRDYKKVREH ESRACDQSQI PSYWKMEKHE RKDNNLPSNM AFEVYQALND  180
VVQRKLRGVS VAVVAGPPPP PSPTEGEAAA GTSSPAASES SSSSGREWGQ KKEKRERKRR  240
RVGRSIERSA SAVAQTLRTC EEQREIRHQQ LMEIKKQRLQ IQEARNHIQG QGIADLVAAV  300
ANLSGINNRS RRRRSEEYEC LYSGEEVRRL KEQNEAMQAE LSSVKTELSQ LRDQMPSLVR  360
TVMHNVMHNI PPPPSMDPGG DAYK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	237	241	RKRRR
2	238	242	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	7e-46	Trihelix family protein