PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022986351.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 300aa    MW: 32339.3 Da    PI: 4.5873
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022986351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00034274297123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     ++C+ C++ F +   L++H +  H
  XP_022986351.1 274 FSCKSCDRAFGSDGALQSHSKAkH 297
                     89*****************88777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MEFWGVEVKS GKPLVVKPGI QKYLHLSQAT LGEIKKDKAN ENVTIFLKIG GQKLVLGILS  60
AEKFPQLSFD LVFEKEFELS HNGKSGSVYC AGYQAFAEDQ EHDGYFDSDS GSEDEELALP  120
PAQNGKPSQK EEKSISDKSN GAKAASLKKP NVKPLEPSKD EDDESDEDDE SDEDDDSDDE  180
SDEEMLNADS GDSDDEDDDS DSDEETPKKI EPTKKRSNES ATKTTPLPAK KAKLASPGKT  240
DSKKGGHTAT PHPAKKTGKT PVAKLESPKS GGQFSCKSCD RAFGSDGALQ SHSKAKHGGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03740.12e-31C2H2 family protein