PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022986337.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 318aa    MW: 35206 Da    PI: 8.9221
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022986337.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.52.7e-064567123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++Cgk F r  nL+ H r H
  XP_022986337.1 45 FVCEICGKGFQRDQNLQLHRRGH 67
                    89*******************88 PP
2zf-C2H2140.00014122143223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                      C++C+ks+  +s+ k H +t+
  XP_022986337.1 122 NCEKCSKSYAVQSDWKAHSKTC 143
                     6*****************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MISKMAADGS NPSLGKKKRS LPGTPDPEAE VIALSPKTLM ATKRFVCEIC GKGFQRDQNL  60
QLHRRGHNLP WKLKQRSNKE AKKRVYVCPE TSCVHHHPSR ALGDLTGIKK HFCRKHGEKK  120
WNCEKCSKSY AVQSDWKAHS KTCGTREYKC DCGTLFSRRD SFITHRAFCD ALAEEAARVS  180
NAMAQHWVMY CDPVCQNPPL GDYYSHQLQE VNQTHMGTMS ATALLQKAAE IGPISSSGHS  240
VILQEGSLFN NGSEFCNAGT TNPIGVIENE NELYTAKRRR TQSEVECGAT GAAGLTRDFL  300
GVSAQTICHS SSTIKGWI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03840.11e-115C2H2 family protein