PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022985867.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

YABBY

Protein Properties

Length: 206aa MW: 23292.9 Da PI: 8.5823

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022985867.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	174.9	5e-54	3	160	2	165
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas.qllaaeshldeslkeelleelkveeenlksnvekeesasts 95 ++f+ +e++CyvqC+ C+til+vsvP +sl++ vtv CGhC+sllsvn+ a+ l s l+++l +e e+ ++ k ++ +s+ + XP_022985867.1 3 HLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATlVPLHFLSSLSRNLPKETCREM----SSGKLFDSFIRSNLKF 93 78999***************************************99876652223344444444443333333....3333333222222222 PP YABBY 96 vsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPk 165 s ++ e+ +p +pp v++PPekrqrvPsayn+fik+ei+r+ka+nP+++h+eaf +aaknWa fP+ XP_022985867.1 94 -SEYE---VEEGLIPVTPPsVNKPPEKRQRVPSAYNCFIKDEIRRLKAENPQMTHKEAFRTAAKNWANFPP 160 .2222...233345555555***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MNHLFELPEK ICYVQCGICT TILLVSVPCS SLSMEVTVTC GHCSSLLSVN MLRATLVPLH 60 FLSSLSRNLP KETCREMSSG KLFDSFIRSN LKFSEYEVEE GLIPVTPPSV NKPPEKRQRV 120 PSAYNCFIKD EIRRLKAENP QMTHKEAFRT AAKNWANFPP TIQQKEDPQN TQIPEVKTPS 180 LRSEVMISNQ LFKPITPNGK QNTNHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	2e-55	YABBY family protein