PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022985844.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 506aa MW: 56990.1 Da PI: 7.8169

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022985844.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.5	2.7e-19	22	77	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t++ql +Le++++ ++yp++e++ +LA++lgLte+q++ WF+ rR k+k+ XP_022985844.1 22 KKRKLKTPTQLIALERFYNDHKYPTEEMKSQLAEQLGLTEKQISGWFCHRRLKDKR 77 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MEQELGNAMH SEENKDSTEK NKKRKLKTPT QLIALERFYN DHKYPTEEMK SQLAEQLGLT 60 EKQISGWFCH RRLKDKRFCE TYTSVRQDRS SGVIQDRGSG LAQDSCGSTK NGDYWHVDPR 120 EVESQKPYGR ELATDNVLER RSHYAENVSN MENTSSESSS SLKDRLLSQS ENPYDTEVSQ 180 YLTHESAFPP SNPKPLNSLR YKPSGYLKVK GEAENAAITA VKRQLGVQYR EDGPSLGVEF 240 QPLPPGAFES QAKGPIHDSY YVGNVLLPRS PDTLTMKKRR ALSSRYEVLS SNMSSQDSYM 300 EEAAPTGITC RPECQENNSI YPLKKSSNYY NKIDPFPRHN SPLNMYEESG GLTLSSSSKR 360 DHRMNSDYNI PRSRTGSVSN NHGSYSSKVA SEQTEMPLHN RGSVGSKSFC RSGYLDYNPK 420 KMSKEMFNGE EKAVNESNDP VRGKIPPTNE LAVAYRCPLD LPRSGYAAKA SFSEKPGRKN 480 LTSRSTMEMP YSFTVDEAED TSSSLD

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MEQELGNAMH SEENKDSTEK NKKRKLKTPT QLIALERFYN DHKYPTEEMK SQLAEQLGLT  60
EKQISGWFCH RRLKDKRFCE TYTSVRQDRS SGVIQDRGSG LAQDSCGSTK NGDYWHVDPR  120
EVESQKPYGR ELATDNVLER RSHYAENVSN MENTSSESSS SLKDRLLSQS ENPYDTEVSQ  180
YLTHESAFPP SNPKPLNSLR YKPSGYLKVK GEAENAAITA VKRQLGVQYR EDGPSLGVEF  240
QPLPPGAFES QAKGPIHDSY YVGNVLLPRS PDTLTMKKRR ALSSRYEVLS SNMSSQDSYM  300
EEAAPTGITC RPECQENNSI YPLKKSSNYY NKIDPFPRHN SPLNMYEESG GLTLSSSSKR  360
DHRMNSDYNI PRSRTGSVSN NHGSYSSKVA SEQTEMPLHN RGSVGSKSFC RSGYLDYNPK  420
KMSKEMFNGE EKAVNESNDP VRGKIPPTNE LAVAYRCPLD LPRSGYAAKA SFSEKPGRKN  480
LTSRSTMEMP YSFTVDEAED TSSSLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	2e-85	HB-other family protein