PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022985843.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 515aa MW: 57969.3 Da PI: 7.7429

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022985843.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.5	2.7e-19	31	86	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t++ql +Le++++ ++yp++e++ +LA++lgLte+q++ WF+ rR k+k+ XP_022985843.1 31 KKRKLKTPTQLIALERFYNDHKYPTEEMKSQLAEQLGLTEKQISGWFCHRRLKDKR 86 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MEQVICCFVL NSELGNAMHS EENKDSTEKN KKRKLKTPTQ LIALERFYND HKYPTEEMKS 60 QLAEQLGLTE KQISGWFCHR RLKDKRFCET YTSVRQDRSS GVIQDRGSGL AQDSCGSTKN 120 GDYWHVDPRE VESQKPYGRE LATDNVLERR SHYAENVSNM ENTSSESSSS LKDRLLSQSE 180 NPYDTEVSQY LTHESAFPPS NPKPLNSLRY KPSGYLKVKG EAENAAITAV KRQLGVQYRE 240 DGPSLGVEFQ PLPPGAFESQ AKGPIHDSYY VGNVLLPRSP DTLTMKKRRA LSSRYEVLSS 300 NMSSQDSYME EAAPTGITCR PECQENNSIY PLKKSSNYYN KIDPFPRHNS PLNMYEESGG 360 LTLSSSSKRD HRMNSDYNIP RSRTGSVSNN HGSYSSKVAS EQTEMPLHNR GSVGSKSFCR 420 SGYLDYNPKK MSKEMFNGEE KAVNESNDPV RGKIPPTNEL AVAYRCPLDL PRSGYAAKAS 480 FSEKPGRKNL TSRSTMEMPY SFTVDEAEDT SSSLD

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MEQVICCFVL NSELGNAMHS EENKDSTEKN KKRKLKTPTQ LIALERFYND HKYPTEEMKS  60
QLAEQLGLTE KQISGWFCHR RLKDKRFCET YTSVRQDRSS GVIQDRGSGL AQDSCGSTKN  120
GDYWHVDPRE VESQKPYGRE LATDNVLERR SHYAENVSNM ENTSSESSSS LKDRLLSQSE  180
NPYDTEVSQY LTHESAFPPS NPKPLNSLRY KPSGYLKVKG EAENAAITAV KRQLGVQYRE  240
DGPSLGVEFQ PLPPGAFESQ AKGPIHDSYY VGNVLLPRSP DTLTMKKRRA LSSRYEVLSS  300
NMSSQDSYME EAAPTGITCR PECQENNSIY PLKKSSNYYN KIDPFPRHNS PLNMYEESGG  360
LTLSSSSKRD HRMNSDYNIP RSRTGSVSNN HGSYSSKVAS EQTEMPLHNR GSVGSKSFCR  420
SGYLDYNPKK MSKEMFNGEE KAVNESNDPV RGKIPPTNEL AVAYRCPLDL PRSGYAAKAS  480
FSEKPGRKNL TSRSTMEMPY SFTVDEAEDT SSSLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	7e-86	HB-other family protein