PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022985466.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 557aa MW: 59656.9 Da PI: 9.3395 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.3 | 2.8e-05 | 63 | 85 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022985466.1 63 FICEVCNKGFQREQNLQLHRRGH 85 89*******************88 PP | |||||||
2 | zf-C2H2 | 12.6 | 0.00042 | 139 | 161 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ XP_022985466.1 139 WKCDKCSKRYAVQSDWKAHSKTC 161 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 557 aa Download sequence |
MAASSSSSLP VYGVGEEATP QMRPPSNSST KKKRNQPGTP SKYYPDAEVI ALSPKTLMAT 60 NRFICEVCNK GFQREQNLQL HRRGHNLPWK LKQKSTKDPK RKVYLCPEPT CVHHHPSRAL 120 GDLTGIKKHY SRKHGEKKWK CDKCSKRYAV QSDWKAHSKT CGTREYRCDC GTLFSRRDSF 180 ITHRAFCDAL AQESARHPPS IGRHLYGAQD HPNIINQSAP GHFTHLLPSS MGSSFRPMSA 240 SGFFLTEQNN QSSFHDDQPN QSQQGFFGNK GFHGVMQFPE IQSHTNNCAT NVFNLGFIPN 300 STADGTTNLN NNNDTNSNST NLNQFSATNN GNNEAAASNI FAVIGDQMSS AALPSLYSNA 360 LGVGGGGGSG IGGSFPHMSA TALLQKAAQL GSTTSSSNTT STLLRSFGSS SNSGGKASDR 420 TLFPLSYGGV TFGEHESNLQ DMMNSFESGS SGSGMFGSGM NSFGGLECSS SRSNMETLED 480 PKLQQDVRGV RMGGTDRLTR DFLGVGQIVR RMSGGGGGGG GGGYSQKQGA EGIVLEGNER 540 NSAPSSQGFG GGNGNYQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02070.1 | 1e-126 | C2H2 family protein |