PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022985459.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 557aa MW: 59656.9 Da PI: 9.3395

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022985459.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.8e-05	63	85	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022985459.1 63 FICEVCNKGFQREQNLQLHRRGH 85 89*******************88 PP
2	zf-C2H2	12.6	0.00042	139	161	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ XP_022985459.1 139 WKCDKCSKRYAVQSDWKAHSKTC 161 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MAASSSSSLP VYGVGEEATP QMRPPSNSST KKKRNQPGTP SKYYPDAEVI ALSPKTLMAT 60 NRFICEVCNK GFQREQNLQL HRRGHNLPWK LKQKSTKDPK RKVYLCPEPT CVHHHPSRAL 120 GDLTGIKKHY SRKHGEKKWK CDKCSKRYAV QSDWKAHSKT CGTREYRCDC GTLFSRRDSF 180 ITHRAFCDAL AQESARHPPS IGRHLYGAQD HPNIINQSAP GHFTHLLPSS MGSSFRPMSA 240 SGFFLTEQNN QSSFHDDQPN QSQQGFFGNK GFHGVMQFPE IQSHTNNCAT NVFNLGFIPN 300 STADGTTNLN NNNDTNSNST NLNQFSATNN GNNEAAASNI FAVIGDQMSS AALPSLYSNA 360 LGVGGGGGSG IGGSFPHMSA TALLQKAAQL GSTTSSSNTT STLLRSFGSS SNSGGKASDR 420 TLFPLSYGGV TFGEHESNLQ DMMNSFESGS SGSGMFGSGM NSFGGLECSS SRSNMETLED 480 PKLQQDVRGV RMGGTDRLTR DFLGVGQIVR RMSGGGGGGG GGGYSQKQGA EGIVLEGNER 540 NSAPSSQGFG GGNGNYQ

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MAASSSSSLP VYGVGEEATP QMRPPSNSST KKKRNQPGTP SKYYPDAEVI ALSPKTLMAT  60
NRFICEVCNK GFQREQNLQL HRRGHNLPWK LKQKSTKDPK RKVYLCPEPT CVHHHPSRAL  120
GDLTGIKKHY SRKHGEKKWK CDKCSKRYAV QSDWKAHSKT CGTREYRCDC GTLFSRRDSF  180
ITHRAFCDAL AQESARHPPS IGRHLYGAQD HPNIINQSAP GHFTHLLPSS MGSSFRPMSA  240
SGFFLTEQNN QSSFHDDQPN QSQQGFFGNK GFHGVMQFPE IQSHTNNCAT NVFNLGFIPN  300
STADGTTNLN NNNDTNSNST NLNQFSATNN GNNEAAASNI FAVIGDQMSS AALPSLYSNA  360
LGVGGGGGSG IGGSFPHMSA TALLQKAAQL GSTTSSSNTT STLLRSFGSS SNSGGKASDR  420
TLFPLSYGGV TFGEHESNLQ DMMNSFESGS SGSGMFGSGM NSFGGLECSS SRSNMETLED  480
PKLQQDVRGV RMGGTDRLTR DFLGVGQIVR RMSGGGGGGG GGGYSQKQGA EGIVLEGNER  540
NSAPSSQGFG GGNGNYQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-126	C2H2 family protein