PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022985032.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 590aa    MW: 64684.8 Da    PI: 4.9433
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022985032.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS362.84.7e-1112185902374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++Ll+cA+  +s +  +a ++L+r+s+   ++gdp++R+a++f eAL++rl+    + +k + ++++s+ ns++ l ++k++++++P+ kf+hl
  XP_022985032.1 218 LKVLLDCARLCDS-EPDRAVKTLNRISKSLREHGDPIERVAFHFGEALRSRLSP---TAMKNCLVTTDSDANSEDFLLSYKALNDACPYSKFAHL 308
                     679******8877.7889999********************************9...666666666677799*********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     taNqaIlea+++++++Hi+Df+i qG+QW+aLlqaLa+R+ g+p ++Ri g+ +p+ g   + +l +tg+rL++fA+ l+++fef++ + + +ed
  XP_022985032.1 309 TANQAILEATQTASKIHIVDFGIVQGVQWAALLQALATRATGKPiKVRISGIPAPSLGdsPAASLCATGNRLSEFAKLLELNFEFEP-ILTPIED 402
                     ****************************************88887**********999889999***********************.799**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     l+ +++rv+++E+laVn++lql++llde  ++ +   + L l kslsPk++++ e ea++n+ +F +rf +al++ysa+f+sle +lpr+s er+
  XP_022985032.1 403 LNESSFRVQSDEVLAVNFMLQLYNLLDEVPTVVH---NALLLAKSLSPKILTLGEYEASLNRVEFYNRFKNALKFYSAIFESLEPNLPRDSPERH 494
                     **************************99888888...999******************************************************* PP

            GRAS 284 kvErellgreivnvvace...gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaW 373
                      +E++llgr+i ++v  e   g++rr r+e +e+W++ le++GFkpv+ls++a +qak ll +++ s  y++ e+  +++ l W+d pL++vS+W
  XP_022985032.1 495 QLEKQLLGRRIADIVGSEeesGSKRRVRMEAKEQWKNLLESSGFKPVALSHYAISQAKILLWNYNySSLYTLIESTPEFLsLAWNDVPLLTVSSW 589
                     ***************987222567*****************************************9999****99999999************** PP

            GRAS 374 r 374
                     r
  XP_022985032.1 590 R 590
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 590 aa     Download sequence    
MAYMCADSGN LMAIAQQVIK QKQQQDQQQH HLSPLLPWTN SNPSPTMASS SSSPTFTFGI  60
SGSAFSDPFQ VAGAADSTDQ PFHFSNLEHP STGFRFFPNF GGGGGGEFES DEWMDSLVGG  120
RDSTDSSDLP SGCDGYGEFG GLYGVDPFNG SQPSLFYREL LPEGSYKTNS VLPPLPSSPP  180
PVKDAKVANS MSGSLQKNNV VESSSSAPEI DSSSPPLLKV LLDCARLCDS EPDRAVKTLN  240
RISKSLREHG DPIERVAFHF GEALRSRLSP TAMKNCLVTT DSDANSEDFL LSYKALNDAC  300
PYSKFAHLTA NQAILEATQT ASKIHIVDFG IVQGVQWAAL LQALATRATG KPIKVRISGI  360
PAPSLGDSPA ASLCATGNRL SEFAKLLELN FEFEPILTPI EDLNESSFRV QSDEVLAVNF  420
MLQLYNLLDE VPTVVHNALL LAKSLSPKIL TLGEYEASLN RVEFYNRFKN ALKFYSAIFE  480
SLEPNLPRDS PERHQLEKQL LGRRIADIVG SEEESGSKRR VRMEAKEQWK NLLESSGFKP  540
VALSHYAISQ AKILLWNYNY SSLYTLIEST PEFLSLAWND VPLLTVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-178GRAS family protein