PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022984879.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 398aa MW: 42520.3 Da PI: 9.2634 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.6 | 1.1e-05 | 57 | 79 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022984879.1 57 FVCEICNKGFQRDQNLQLHRRGH 79 89*******************88 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 398 aa Download sequence |
MPTDLETSGE ASISSTGNQP PPPKSAVKKK RNLPGMPDPE AEVIALSPET LLATNRFVCE 60 ICNKGFQRDQ NLQLHRRGHN LPWKLRQRTS KEVKKKVYVC PEPSCVHHHP SRALGDLTGI 120 KKHFCRKHSE KKWKCDRCSK KYAVKSDWKA HSKICGTREY RCDCETVFSR RDSFITHRAF 180 CDALTKEAAV TLSPATAEIP NLESDPQVQP PSCSSPPPTA ASLSATSAAA PVAPPSSTEA 240 ISSISSIQKK ASPGNPPQPL VESPGKTTVP SNSSSSNATV LASLFASPAA SLSLQPPQQP 300 GFCDLLRAMA RPDRAAEITS PLVFEPLSLC LSNHSEWSLF GAGIQESRPY VPPTPPAMSA 360 TGLLQKAAQM GAAAAASTSV FRGFGLSSSS SSAQQGSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50700.1 | 1e-121 | C2H2 family protein |