PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983951.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 291aa MW: 34467 Da PI: 8.4988

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983951.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	75	1.3e-23	46	128	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ qe+++ +++r e+++++ ++k++k lWe s+km+e+gf+rs++qCk+kw+nl + yk ++++e ++ ++++p++++l+ XP_022983951.1 46 QWSLQETKEFLTIRAELDRTFMETKRNKLLWEITSSKMKEKGFNRSAEQCKCKWKNLVTHYKGCETMEPEN--L-RQQFPFYTELK 128 7******************************************************************95..3.4589*9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MEGHHPHHLI PLHHQQQFQL RPPSHLHQSL TVSADPTLAA PDRFPQWSLQ ETKEFLTIRA 60 ELDRTFMETK RNKLLWEITS SKMKEKGFNR SAEQCKCKWK NLVTHYKGCE TMEPENLRQQ 120 FPFYTELKAI FGARMQRMFM AEAESGGSGS KKKMKTLSSD DEEENEDSNG DGGETKVNSR 180 KRKKVKGTTM ATDGGGGSGS RLKEILEDFM NQQMQMEVQW REAFEAREKE REMREMEWRR 240 NMEALEHERI MLERSWRERE EQRRIREEIR GEKRDALITA LLNKIRRDDH M

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	180	184	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	8e-58	Trihelix family protein