PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983548.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 351aa MW: 39154.4 Da PI: 6.6915

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983548.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.3	1.4e-40	70	146	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dl+++keyhrrh+vC+ hsk+pvv+v+g+e+rfCqqCsrfh l efDe krsCr+rL++hn+rrrk+q+ XP_022983548.1 70 CLVDGCDSDLKNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHPLGEFDEVKRSCRKRLDGHNRRRRKPQP 146 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MDWGWGTLSG KPTFREKNHT PPPPTSFSDS IGSSNNNEEP ILEGSSQESS SSNGSSKRTR 60 TLQGTQNQSC LVDGCDSDLK NCKEYHRRHR VCDLHSKTPV VMVRGEEKRF CQQCSRFHPL 120 GEFDEVKRSC RKRLDGHNRR RRKPQPESLF MSSRDFLSNC KGPIVLQFSN QQIHVPDEHG 180 RNLWSMRPEE TSMVPPNSSA YFSYGGEGDN EELPFFLHKN GTRQGKQMVS SRLCFNQQLP 240 DAISQGSEVG SQKQAVPTNT SPVDSGCALY LLSSHPDAGL SSLIQSHLSL PVQTPETELH 300 FSSLSDFSAS FGSKDKPVCE TNLDNGLVLE MEASDGLFQS EAPHKFPVSW E

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MDWGWGTLSG KPTFREKNHT PPPPTSFSDS IGSSNNNEEP ILEGSSQESS SSNGSSKRTR  60
TLQGTQNQSC LVDGCDSDLK NCKEYHRRHR VCDLHSKTPV VMVRGEEKRF CQQCSRFHPL  120
GEFDEVKRSC RKRLDGHNRR RRKPQPESLF MSSRDFLSNC KGPIVLQFSN QQIHVPDEHG  180
RNLWSMRPEE TSMVPPNSSA YFSYGGEGDN EELPFFLHKN GTRQGKQMVS SRLCFNQQLP  240
DAISQGSEVG SQKQAVPTNT SPVDSGCALY LLSSHPDAGL SSLIQSHLSL PVQTPETELH  300
FSSLSDFSAS FGSKDKPVCE TNLDNGLVLE MEASDGLFQS EAPHKFPVSW E

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	144	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	1e-44	SBP family protein