PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022983256.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRAS | ||||||||
Protein Properties | Length: 547aa MW: 59867.6 Da PI: 5.556 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 392.1 | 6e-120 | 174 | 532 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 lv+ Ll+cA+avs+++ +la+a+L++++ l+ ++ +++++a yft+AL r++r + l+p e s ++ +++l + f+e +P+lkfsh XP_022983256.1 174 LVHSLLACADAVSKNNINLAEAILKHIKILVDAQAGAVRKVAGYFTQALTYRIYR-----FYPLKPFECS-SSYTDQL--QIHFYESCPYLKFSH 260 689****************************************************.....4456666665.2233333..335************ PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190 +taNqaIle++ + vH+iDf+++qGlQWp+L+qaLa Rp+gpp + +Tg++sp + l+++g +La+fAe++gv+fef+ +++k++ dle XP_022983256.1 261 FTANQAILESIGLSGSVHVIDFNLQQGLQWPPLIQALALRPGGPPAFYLTGISSP---PGDGLQKVGTKLANFAEKFGVKFEFRGFYCKNFGDLE 352 ******************************************************5...69*********************************** PP GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285 + +L+++ E++a+n++++lhrll+ ++++++ L ++k l+Pk++++veq a+hn++sF+erf+eal+yys+lfd+le+ ++ s + + XP_022983256.1 353 PFMLDLE-AETVAINSIFELHRLLAYPGAIQK----ALTTIKALNPKIITLVEQVANHNGPSFMERFTEALHYYSSLFDALEEASAAGSLDVVRS 442 ****996.6***************99999999....*********************************************88866777666666 PP GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrk.vk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 E+ lgr+i+nvv ceg++r+erhet+++W +r++++GF+ ++l+++a kqa++ll+ ++ +gy+vee++gsl+lgW++rpL+++SaW+ XP_022983256.1 443 EEY-LGRQICNVVGCEGTDRVERHETVAQWLSRMQSSGFEMIHLGSNAFKQANTLLSAlFHgRNGYKVEENNGSLTLGWHTRPLIATSAWT 532 655.**************************************************997526689***************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 547 aa Download sequence |
MKQDNTHQSP NPTAAETKKL AVGDQDEDKL LAALGYNVRS SDMSDVALKI EQLEMVMGLS 60 EHDGISPLSS NTNHYNPSDM SSWIETMIDE LNNPVHAGAE SIPAIATTAA FTDDSEYDLR 120 VIPGISAFPQ LNSTSTRKRY KNSDCESVLV NAPSFSEPSR SVVLVDSAET GVHLVHSLLA 180 CADAVSKNNI NLAEAILKHI KILVDAQAGA VRKVAGYFTQ ALTYRIYRFY PLKPFECSSS 240 YTDQLQIHFY ESCPYLKFSH FTANQAILES IGLSGSVHVI DFNLQQGLQW PPLIQALALR 300 PGGPPAFYLT GISSPPGDGL QKVGTKLANF AEKFGVKFEF RGFYCKNFGD LEPFMLDLEA 360 ETVAINSIFE LHRLLAYPGA IQKALTTIKA LNPKIITLVE QVANHNGPSF MERFTEALHY 420 YSSLFDALEE ASAAGSLDVV RSEEYLGRQI CNVVGCEGTD RVERHETVAQ WLSRMQSSGF 480 EMIHLGSNAF KQANTLLSAL FHGRNGYKVE ENNGSLTLGW HTRPLIATSA WTVPVASGSG 540 TGTGEPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03450.1 | 0.0 | GRAS family protein |