PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983074.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 259aa MW: 27897.5 Da PI: 9.6386

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983074.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00088	92	114	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ F++ L H +H XP_022983074.1 92 YQCKTCDRYFPSFQALGGHRASH 114 9***********99999998887 PP
2	zf-C2H2	14	0.00015	172	194	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_022983074.1 172 HECSICGAEFSSGQALGGHMRRH 194 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MAETPDENQA QIMKGKRTKR SRPPSVSSAS SAADCSSSSA GLAGEGEQDQ DLANCLMLLA 60 QGRTRTGACS SSSSSPVLVR QKLAANQSLF LYQCKTCDRY FPSFQALGGH RASHKKPKLN 120 NIVNTSVRQP QQHPHFTPSD SIQLSLQLST TSRPPPPPPS AAVNDLIKPK VHECSICGAE 180 FSSGQALGGH MRRHRALTAN PSRGATTTTT TTPQLQDLMT KKKRNMLELD LNLPAPEEDR 240 HRAPVAVFSG ASPLVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	6e-43	C2H2 family protein