PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982984.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 391aa MW: 41787.7 Da PI: 8.9388

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982984.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	138.7	1.7e-43	82	157	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC++dls++k y++rhkvC++hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ XP_022982984.1 82 RCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 157 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MEMDCSSLTE SGGSSTSSPP NSSAESLNGL KFGHKIYFED VGIGELPKSG GGGSFSSSPL 60 IASTPTKKLR GGGVVQPAQP PRCQVEGCKV DLSDVKAYYS RHKVCTMHSK SPKVIVAGLE 120 QRFCQQCSRF HQLPEFDQGK RSCRRRLAGH NERRRKPPPG ALLSTRYGRF SSSIFENSSR 180 VGSFLMDFSA YPKLTGKDVW SSSGMKASSE RVPGNQGITS MGKYIPNPWQ SNPSELLLPV 240 SSGGTSYSGP GNPSGECING VTDSSCALSL LSNQTWGSRN RTTPLEVNAA LLNAEGALVA 300 QTTSAHAATN HFPMSMSMSS WSFKGNEAPA SISLDLASDL GLNHQVSQAL TTSSFSGDVQ 360 FPNQGSRRPY MELGQSAGAF DSTQQHLHWS L

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MEMDCSSLTE SGGSSTSSPP NSSAESLNGL KFGHKIYFED VGIGELPKSG GGGSFSSSPL  60
IASTPTKKLR GGGVVQPAQP PRCQVEGCKV DLSDVKAYYS RHKVCTMHSK SPKVIVAGLE  120
QRFCQQCSRF HQLPEFDQGK RSCRRRLAGH NERRRKPPPG ALLSTRYGRF SSSIFENSSR  180
VGSFLMDFSA YPKLTGKDVW SSSGMKASSE RVPGNQGITS MGKYIPNPWQ SNPSELLLPV  240
SSGGTSYSGP GNPSGECING VTDSSCALSL LSNQTWGSRN RTTPLEVNAA LLNAEGALVA  300
QTTSAHAATN HFPMSMSMSS WSFKGNEAPA SISLDLASDL GLNHQVSQAL TTSSFSGDVQ  360
FPNQGSRRPY MELGQSAGAF DSTQQHLHWS L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	3e-60	SBP family protein