PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022982418.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 177aa    MW: 20082 Da    PI: 8.6016
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022982418.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox43.45.8e-1476126256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +ftkeq   Lee F+++++ s     eLA++l+L  rqV vWFqNrRa+ k
  XP_022982418.1  76 RKKLRFTKEQSANLEESFKEHSTFSP----ELARNLKLRARQVEVWFQNRRARTK 126
                     78999*******************98....6**********************98 PP
2HD-ZIP_I/II99.92.3e-3276160190
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                     +kk+r++keq++ LEesF+e+++ +pe    lar+L+l++rqv+vWFqnrRARtk+kq+E+d+e +k+++++lkee++rL+ke +eL+ +
  XP_022982418.1  76 RKKLRFTKEQSANLEESFKEHSTFSPE----LARNLKLRARQVEVWFQNRRARTKLKQTEMDCELMKKCCEKLKEETTRLQKELQELK-S 160
                     69***********************95....9*******************************************************9.4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MAGVKKKKQQ VLKFDDIIMP SLSLGLSIVV ESPNEFIQLS SSGSPVSSFS NSSGYKRERD  60
GCGGEEAEED EDGSPRKKLR FTKEQSANLE ESFKEHSTFS PELARNLKLR ARQVEVWFQN  120
RRARTKLKQT EMDCELMKKC CEKLKEETTR LQKELQELKS LKLTAPPFAT LTVCPSC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121129RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22800.12e-24HD-ZIP family protein