PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982382.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 354aa MW: 39715 Da PI: 9.2229

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982382.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.8	2e-05	51	73	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_022982382.1 51 FICEICNKGFQRDQNLQLHRRGH 73 89*******************88 PP
2	zf-C2H2	13.1	0.00029	127	149	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H + + XP_022982382.1 127 WKCEKCSKRYAVQSDWKAHSKIC 149 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MMKKGNLTVE EHSPPPPPPP SKKKRNLPGN PDPDAEVIAL SPKALLTTNR FICEICNKGF 60 QRDQNLQLHR RGHNLPWKLK QRSNKEVRKK VYVCPEPTCV HHHPSRALGD LTGIKKHFCR 120 KHGEKKWKCE KCSKRYAVQS DWKAHSKICG TREYRCDCGT LFSRRDSFIT HRAFCDALAQ 180 ESTNFASSAM NNSNPIQPIF STLRQFPLKT ENQDPFYPST SNILNPFNPN PTSIGFGLAG 240 PGSSLNPVFG SAWEMNSPNM MAFEEPSFEE ALNGILMNNR ANKDGDKCSG GGSGGGAEEI 300 TRDLLGLRAL ARQPDQRMFE NEIVNDNLNL GSSSSSSMFG LHLNHQTQTM FWRD

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MMKKGNLTVE EHSPPPPPPP SKKKRNLPGN PDPDAEVIAL SPKALLTTNR FICEICNKGF  60
QRDQNLQLHR RGHNLPWKLK QRSNKEVRKK VYVCPEPTCV HHHPSRALGD LTGIKKHFCR  120
KHGEKKWKCE KCSKRYAVQS DWKAHSKICG TREYRCDCGT LFSRRDSFIT HRAFCDALAQ  180
ESTNFASSAM NNSNPIQPIF STLRQFPLKT ENQDPFYPST SNILNPFNPN PTSIGFGLAG  240
PGSSLNPVFG SAWEMNSPNM MAFEEPSFEE ALNGILMNNR ANKDGDKCSG GGSGGGAEEI  300
TRDLLGLRAL ARQPDQRMFE NEIVNDNLNL GSSSSSSMFG LHLNHQTQTM FWRD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	78	90	KLKQRSNKEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-110	C2H2 family protein