PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022982252.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 278aa    MW: 32940.2 Da    PI: 9.1369
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022982252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix613e-1914102186
        trihelix   1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W+++e+++ i++r ++e++l + +       +kk+lW+  s++mrergf r++ qCk+kw+nl  ryk  +++ k+       +cp+f++++
  XP_022982252.1  14 QWSDEETREFIRIRADLERDLMAVStgegvavKKKTLWDMASARMRERGFWRTAYQCKCKWKNLLSRYKGKETTHKE----FGWQCPFFEEIR 102
                     7*********************8655667788**************************************9999997....4668****9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MTSSAMAATA QQHQWSDEET REFIRIRADL ERDLMAVSTG EGVAVKKKTL WDMASARMRE  60
RGFWRTAYQC KCKWKNLLSR YKGKETTHKE FGWQCPFFEE IRAVFAAREK AMHRLLLEPE  120
AGSSATKKRG RERSLEEFSD LKELDEEESE EEIPTQSNSQ KGKAIGTLPA KSSRTAGSKR  180
SSSSVSNEIL ELLKGFFQWQ QRMEMEWREI LERHYNNRRM FEQEWRDSME KLERERLMAE  240
KAWREREEQR KKRQDIRAEG MDALLTDLLN KLNRENNL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1244253REREEQRKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.17e-26Trihelix family protein