PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982145.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 420aa MW: 46047.4 Da PI: 9.4225

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982145.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.2e-05	180	202	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg++Fs ++L+ H+ + H XP_022982145.1 180 PCPQCGEMFSKMESLELHQAVrH 202 7******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MAHSTSLAIN AEKSRKTKPI NTERRKKHQN PPPSQPPPPP SAQSSWDQIK NLITCKQVEA 60 TRVHEPEKRP PAANSKLGSS YSSICRFRDV VHGNAKIVHR PDNSPETSSL GQETRLLTTK 120 ATNGSSSRSL TAPTRTKNGA SASYSSSSRV LQLRKLSGCY ECHAIVDPSR YPIPRSSICP 180 CPQCGEMFSK MESLELHQAV RHAVSELGPD DSGRNIVEII FKSSWLKIDR PICKIERILK 240 VHNTQRTIQR FEDCRDAVKT RALASTRKNP RCAADGNELL RFHCSELLCD LGSRGSTGLC 300 GSIPGCRVCS VIRHGFQCKP GEPAGVRTTA SSGRAHDSFE CGDGRRRAML VCRVIAGRVK 360 RIAEDLSAAA VEEENLSAAA ASYDSVSRQS GVYSNLEELI IFNPKAILPC FVVIYEALQT

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MAHSTSLAIN AEKSRKTKPI NTERRKKHQN PPPSQPPPPP SAQSSWDQIK NLITCKQVEA  60
TRVHEPEKRP PAANSKLGSS YSSICRFRDV VHGNAKIVHR PDNSPETSSL GQETRLLTTK  120
ATNGSSSRSL TAPTRTKNGA SASYSSSSRV LQLRKLSGCY ECHAIVDPSR YPIPRSSICP  180
CPQCGEMFSK MESLELHQAV RHAVSELGPD DSGRNIVEII FKSSWLKIDR PICKIERILK  240
VHNTQRTIQR FEDCRDAVKT RALASTRKNP RCAADGNELL RFHCSELLCD LGSRGSTGLC  300
GSIPGCRVCS VIRHGFQCKP GEPAGVRTTA SSGRAHDSFE CGDGRRRAML VCRVIAGRVK  360
RIAEDLSAAA VEEENLSAAA ASYDSVSRQS GVYSNLEELI IFNPKAILPC FVVIYEALQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-162	C2H2 family protein