PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982005.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 1034aa MW: 114684 Da PI: 8.8161

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982005.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.5	2.4e-40	116	193	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dls+ak+yhrrhkvC+ hsk++++lv++l+qrfCqqCsrfh lsefD++krsCrrrLa+hn rrrk+q+ XP_022982005.1 116 MCQVDNCKEDLSNAKDYHRRHKVCQLHSKSTKALVANLMQRFCQQCSRFHPLSEFDNGKRSCRRRLAGHNWRRRKTQP 193 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1034 aa Download sequence
MDDLGAQVVP PVFIHQTFPT HYTGLPSTSN KRPLSYHNHL HHHSHTWNPK TWDWDTDTLS 60 SNPPTLRYST PLQDDQTLRL NLGPAPNFNC VEQPLSKPPK KLRPDPGSPA TATFPMCQVD 120 NCKEDLSNAK DYHRRHKVCQ LHSKSTKALV ANLMQRFCQQ CSRFHPLSEF DNGKRSCRRR 180 LAGHNWRRRK TQPEDVTSRL TPPGSRGPPS GGNLDIFSLL AVLARAQGEN EGQSVESLLS 240 ANSDQLIQTL TKVNSLPLPA EFAAKVPNLE NFMGKASPGS SLQHQNKLNR NPSSSSTMDL 300 LTVLSATLVA SAPDALAMLS QKSSPSSASE KTRSSCPSGS DLQNRPLEFP SVGGERSSTS 360 YQSPVEESDG QVQGSRVGLP LQLFSSLPEH GTPLNLTASR KYFSSDSSNP IEERSPSSSP 420 PLLQKLFPVQ RSEETTSNRK IPIRKEVSGI VEVPKPPSSA MPFELFRESD RGGGPNLLHT 480 VPYQAGYTSS GSDHSPSNLN SDAQDCTGRI SFKLFDKDPS QFPGTLRTQI YNWLSNCPSE 540 MESYIRPGCV VLSIYMSMSS IAWEQLEENL VLHVKSLVHG ENLEFWRSGR FLVYSGRQLA 600 SHKDGKIRLN KSSKAWSNPE LISVSPLAVV SGQKTSFLLR GRNLKNPCTK IHCTFMGGYI 660 SKEVMGLSRQ GTYDEIQSGN YKIGDASPST LGRCFIEVEN GFRGNSFPVI IADSAICKEL 720 RHLESVFDEF RVTDISSESH SCVPLQPRLK DETLQFLNEL GWLFQRERSS SKLDNPIFLI 780 RRFKFLLTFS VERDFCALLK TLLDILVKKC LITNGLSMKS LEMISEVQLL NRAVKRRCRP 840 MVDLLVHYYV SGFGDEEKKY LFPPNVIGPG RITPMHLAAS MADSDDMVDA LTNDPLEIGL 900 NCWSSQVDAS GQSARGYALM KGNHSCNELV DRKLGDRKKG QVSVRVGNEI EVGVSSSERS 960 RVQGRCCSRC AVVAGRCYKR VPGSGTHRLL HRPYIHSMLA IGAVCVCVCL FLRGSPDIGL 1020 VAPFKWENLR YGTI

Sequence ? help Back to Top

Protein Sequence Length: 1034 aa Download sequence

MDDLGAQVVP PVFIHQTFPT HYTGLPSTSN KRPLSYHNHL HHHSHTWNPK TWDWDTDTLS  60
SNPPTLRYST PLQDDQTLRL NLGPAPNFNC VEQPLSKPPK KLRPDPGSPA TATFPMCQVD  120
NCKEDLSNAK DYHRRHKVCQ LHSKSTKALV ANLMQRFCQQ CSRFHPLSEF DNGKRSCRRR  180
LAGHNWRRRK TQPEDVTSRL TPPGSRGPPS GGNLDIFSLL AVLARAQGEN EGQSVESLLS  240
ANSDQLIQTL TKVNSLPLPA EFAAKVPNLE NFMGKASPGS SLQHQNKLNR NPSSSSTMDL  300
LTVLSATLVA SAPDALAMLS QKSSPSSASE KTRSSCPSGS DLQNRPLEFP SVGGERSSTS  360
YQSPVEESDG QVQGSRVGLP LQLFSSLPEH GTPLNLTASR KYFSSDSSNP IEERSPSSSP  420
PLLQKLFPVQ RSEETTSNRK IPIRKEVSGI VEVPKPPSSA MPFELFRESD RGGGPNLLHT  480
VPYQAGYTSS GSDHSPSNLN SDAQDCTGRI SFKLFDKDPS QFPGTLRTQI YNWLSNCPSE  540
MESYIRPGCV VLSIYMSMSS IAWEQLEENL VLHVKSLVHG ENLEFWRSGR FLVYSGRQLA  600
SHKDGKIRLN KSSKAWSNPE LISVSPLAVV SGQKTSFLLR GRNLKNPCTK IHCTFMGGYI  660
SKEVMGLSRQ GTYDEIQSGN YKIGDASPST LGRCFIEVEN GFRGNSFPVI IADSAICKEL  720
RHLESVFDEF RVTDISSESH SCVPLQPRLK DETLQFLNEL GWLFQRERSS SKLDNPIFLI  780
RRFKFLLTFS VERDFCALLK TLLDILVKKC LITNGLSMKS LEMISEVQLL NRAVKRRCRP  840
MVDLLVHYYV SGFGDEEKKY LFPPNVIGPG RITPMHLAAS MADSDDMVDA LTNDPLEIGL  900
NCWSSQVDAS GQSARGYALM KGNHSCNELV DRKLGDRKKG QVSVRVGNEI EVGVSSSERS  960
RVQGRCCSRC AVVAGRCYKR VPGSGTHRLL HRPYIHSMLA IGAVCVCVCL FLRGSPDIGL  1020
VAPFKWENLR YGTI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	832	837	RAVKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein