PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022981513.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 382aa MW: 44485.3 Da PI: 7.5701

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022981513.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	85	9.3e-27	115	211	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt+++v++Li++ ++m+e++++g+ +kk++W++vsk+m erg+++sp+qC++k+++lnkryk+++++ +++ ++e++++ +++d XP_022981513.1 115 KWTNKMVKLLITVLSYMGEDSGSGCgslgtrrlvvlQKKGKWKSVSKVMGERGYHVSPQQCEDKFNDLNKRYKRLNDMLGRGtSCEVVENPVLLD 209 7********************999999999************************************************5699999888877 PP trihelix 84 ql 85 + XP_022981513.1 210 GI 211 65 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MKYLKASMIP EGVSYGGGDW QGSMGVPCQQ PQYTLNLCHQ YHDSSRYQSS VGSSVRGSFP 60 LTMGSLQQRD HWIGLADHDN REMGNDMTSD EDEEGIYVHN DARNEKNGSQ WQRVKWTNKM 120 VKLLITVLSY MGEDSGSGCG SLGTRRLVVL QKKGKWKSVS KVMGERGYHV SPQQCEDKFN 180 DLNKRYKRLN DMLGRGTSCE VVENPVLLDG IDYLKAKEKD DVRKILNSKH LFYEEMCSYH 240 NGNRLHLPHD PELLHSLQLV LGNRIDCDND DLWKLQHGYE EGNNSSRVAR FVTNQVVAET 300 DRICEVQQVR IESHCIELEE KRVRIEIERL ELEDDRMKWE RFKKKRDWEL EKLKLENERM 360 RLENGLIASQ LKKRRCSHLH RI

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MKYLKASMIP EGVSYGGGDW QGSMGVPCQQ PQYTLNLCHQ YHDSSRYQSS VGSSVRGSFP  60
LTMGSLQQRD HWIGLADHDN REMGNDMTSD EDEEGIYVHN DARNEKNGSQ WQRVKWTNKM  120
VKLLITVLSY MGEDSGSGCG SLGTRRLVVL QKKGKWKSVS KVMGERGYHV SPQQCEDKFN  180
DLNKRYKRLN DMLGRGTSCE VVENPVLLDG IDYLKAKEKD DVRKILNSKH LFYEEMCSYH  240
NGNRLHLPHD PELLHSLQLV LGNRIDCDND DLWKLQHGYE EGNNSSRVAR FVTNQVVAET  300
DRICEVQQVR IESHCIELEE KRVRIEIERL ELEDDRMKWE RFKKKRDWEL EKLKLENERM  360
RLENGLIASQ LKKRRCSHLH RI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-101	Trihelix family protein