PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022981510.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | Trihelix | ||||||||
Protein Properties | Length: 382aa MW: 44485.3 Da PI: 7.5701 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 85 | 9.3e-27 | 115 | 211 | 1 | 85 |
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt+++v++Li++ ++m+e++++g+ +kk++W++vsk+m erg+++sp+qC++k+++lnkryk+++++ +++ ++e++++ +++d XP_022981510.1 115 KWTNKMVKLLITVLSYMGEDSGSGCgslgtrrlvvlQKKGKWKSVSKVMGERGYHVSPQQCEDKFNDLNKRYKRLNDMLGRGtSCEVVENPVLLD 209 7**********************999999999**************************************************5699999888877 PP trihelix 84 ql 85 + XP_022981510.1 210 GI 211 65 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 382 aa Download sequence |
MKYLKASMIP EGVSYGGGDW QGSMGVPCQQ PQYTLNLCHQ YHDSSRYQSS VGSSVRGSFP 60 LTMGSLQQRD HWIGLADHDN REMGNDMTSD EDEEGIYVHN DARNEKNGSQ WQRVKWTNKM 120 VKLLITVLSY MGEDSGSGCG SLGTRRLVVL QKKGKWKSVS KVMGERGYHV SPQQCEDKFN 180 DLNKRYKRLN DMLGRGTSCE VVENPVLLDG IDYLKAKEKD DVRKILNSKH LFYEEMCSYH 240 NGNRLHLPHD PELLHSLQLV LGNRIDCDND DLWKLQHGYE EGNNSSRVAR FVTNQVVAET 300 DRICEVQQVR IESHCIELEE KRVRIEIERL ELEDDRMKWE RFKKKRDWEL EKLKLENERM 360 RLENGLIASQ LKKRRCSHLH RI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21200.1 | 1e-101 | Trihelix family protein |