PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022981465.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 465aa MW: 53011.8 Da PI: 8.4548

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022981465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	83.2	3.5e-26	53	138	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++qe+laL+++r++m+ +r++ lk+plW+e+s+k+ e gf+r+pk+Ckek+en+ k++k++k g+ +++++s++ +++ d+le XP_022981465.1 53 RWPRQETLALLKIRSDMDAIFRDATLKAPLWDEISRKLGELGFNRTPKKCKEKFENVYKYHKRTKIGRCGKSDNSKKVYKFSDELE 138 8********************************************************************99988888899988887 PP
2	trihelix	101.4	7.2e-32	319	403	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k ev aLi++r eme +++++ +k+ lWee+s+ mr g++rs+k+Ckekwen+nk++kk+k+g+kkr e+s+tcpyf+ l+ XP_022981465.1 319 RWPKAEVEALIRLRMEMEMKYEENGQKGLLWEEISAGMRGIGYNRSSKRCKEKWENINKYFKKVKDGKKKR-GEDSKTCPYFHLLD 403 8*******************************************************************8.89999****998 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MDVVDSRVTV APHPEAAEPN EVGGGDSGGS NSGEEDKGLM LFEDGEKNFG GNRWPRQETL 60 ALLKIRSDMD AIFRDATLKA PLWDEISRKL GELGFNRTPK KCKEKFENVY KYHKRTKIGR 120 CGKSDNSKKV YKFSDELEAF DIHHHNHISV QSHHRHSIPP QRLIAASTVS STINTTINHS 180 LPLNFQNISS NGLFLSSTSS STASEEDKDT FRKTKKRKWR DFFVNLTKEV IEKQESLQLK 240 FLESLERIEN QRKLRDEAWR MKEMTRANHD HQVLVQEMSI TAAKDAAVIA FLQKISPSTP 300 PVPHNVIAKV STGGGCGSRW PKAEVEALIR LRMEMEMKYE ENGQKGLLWE EISAGMRGIG 360 YNRSSKRCKE KWENINKYFK KVKDGKKKRG EDSKTCPYFH LLDALYKEKE KQASFDMNAQ 420 MEPLMVEPEQ QWPPPFQANH QMVHTIKGEG NQDEDGGSSS TDVED

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MDVVDSRVTV APHPEAAEPN EVGGGDSGGS NSGEEDKGLM LFEDGEKNFG GNRWPRQETL  60
ALLKIRSDMD AIFRDATLKA PLWDEISRKL GELGFNRTPK KCKEKFENVY KYHKRTKIGR  120
CGKSDNSKKV YKFSDELEAF DIHHHNHISV QSHHRHSIPP QRLIAASTVS STINTTINHS  180
LPLNFQNISS NGLFLSSTSS STASEEDKDT FRKTKKRKWR DFFVNLTKEV IEKQESLQLK  240
FLESLERIEN QRKLRDEAWR MKEMTRANHD HQVLVQEMSI TAAKDAAVIA FLQKISPSTP  300
PVPHNVIAKV STGGGCGSRW PKAEVEALIR LRMEMEMKYE ENGQKGLLWE EISAGMRGIG  360
YNRSSKRCKE KWENINKYFK KVKDGKKKRG EDSKTCPYFH LLDALYKEKE KQASFDMNAQ  420
MEPLMVEPEQ QWPPPFQANH QMVHTIKGEG NQDEDGGSSS TDVED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	1e-59	Trihelix family protein