PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022981431.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 579aa    MW: 64470.8 Da    PI: 5.2914
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022981431.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS419.13.8e-1282095781373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+elL+ecA+a++++ +e  ++l+a  +  +s +g+p+qRl ay++e+L ar  +s+ ++y+al+++e +   s++ l+++++++e++P+lkf++
  XP_022981431.1 209 LKELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESGANIYRALNCREPA---SDDLLSYMHMLYEICPYLKFGY 300
                     5799*****************************************************************9...99******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN aI ea  +e+r+HiiDf+i+qG+QW++LlqaLa+Rp+g+p++RiTg+++p s+  + e le +++rLa++ ++ g+p+ef+ l      d
  XP_022981431.1 301 MAANGAIAEACRNEDRIHIIDFQITQGTQWLTLLQALAARPGGAPHVRITGIDDPVSKyaRGEGLEVVERRLAEVSRKYGIPVEFHGL-PVFAPD 394
                     *******************************************************999999**************************6.777899 PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++  +L+++pgEalaVn+ lqlh+++desv+++++rd +L++vkslsP+vv++veqe+++n+++F++rf+e+l+yy a+f+s++++lpr+s++ i
  XP_022981431.1 395 VTRGMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMVKSLSPRVVTLVEQESNTNTTPFFNRFVETLDYYLAIFESIDVTLPRNSKKGI 489
                     9********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     ++E+++l+++ivnv+aceg+er+erhe ++kW+ rl++aGF + pls+++++ +++llr ++ + y++ e++g+++lgWk+r+L+s+SaW
  XP_022981431.1 490 NIEQHCLAKDIVNVIACEGREREERHELFGKWKTRLTMAGFCQFPLSSYVNSVIRSLLRCYS-EHYTLVEKDGAMLLGWKNRNLISASAW 578
                     **********************************************************9999.66************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 579 aa     Download sequence    
MDSRQLFGFG VNSAGFSCTP YSSVPSLPNT LLGPLKFSVR NSPASSSFFS SYFELDSFLE  60
TTVSDNQDQR NSPENLSGLG PSCNSSFETN QIASSSNLDP GLNAFVYNGC SNENISFTLK  120
QLESVLMGPD NEEVVSKPDA SFGDSCRPQI MGQRSYLWSQ DRQGESNLVQ SQTLPVSISR  180
RSQAVHLGKR QKSMDESILQ QGGSPYDNLK ELLIECARAL AENRMEDFDN LVAIARGAVS  240
ISGEPIQRLG AYMVEGLVAR KEESGANIYR ALNCREPASD DLLSYMHMLY EICPYLKFGY  300
MAANGAIAEA CRNEDRIHII DFQITQGTQW LTLLQALAAR PGGAPHVRIT GIDDPVSKYA  360
RGEGLEVVER RLAEVSRKYG IPVEFHGLPV FAPDVTRGML DIRPGEALAV NFPLQLHHTP  420
DESVDVNNPR DGLLRMVKSL SPRVVTLVEQ ESNTNTTPFF NRFVETLDYY LAIFESIDVT  480
LPRNSKKGIN IEQHCLAKDI VNVIACEGRE REERHELFGK WKTRLTMAGF CQFPLSSYVN  540
SVIRSLLRCY SEHYTLVEKD GAMLLGWKNR NLISASAWY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-161GRAS family protein